Gene : Cagra.2515s0050 C. grandiflora v1.1
Defline:  (1 of 7) PTHR10334:SF204 - ALLERGEN V5/TPX-1-RELATED FAMILY PROTEIN-RELATED Genomic Order:  50
Name:  ? Cagra.2515s0050 Secondary Identifier:  ? PAC:28894441
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2515s0050 0.5kb upstream 0.5kb upstream 1079 true Scaffold2515: 153127-154205 Capsella grandiflora
Cagra.2515s0050 0.5kb upstream 0.5kb upstream 500 false Scaffold2515: 153127-153626 Capsella grandiflora
Cagra.2515s0050 0.5kb downstream 0.5kb downstream 1079 true Scaffold2515: 153627-154705 Capsella grandiflora
Cagra.2515s0050 0.5kb downstream 0.5kb downstream 500 false Scaffold2515: 154206-154705 Capsella grandiflora
Cagra.2515s0050 1.0kb upstream 1.0kb upstream 1579 true Scaffold2515: 152627-154205 Capsella grandiflora
Cagra.2515s0050 1.0kb upstream 1.0kb upstream 1000 false Scaffold2515: 152627-153626 Capsella grandiflora
Cagra.2515s0050 1.0kb downstream 1.0kb downstream 1579 true Scaffold2515: 153627-155205 Capsella grandiflora
Cagra.2515s0050 1.0kb downstream 1.0kb downstream 1000 false Scaffold2515: 154206-155205 Capsella grandiflora
Cagra.2515s0050 2.0kb upstream 2.0kb upstream 2579 true Scaffold2515: 151627-154205 Capsella grandiflora
Cagra.2515s0050 2.0kb upstream 2.0kb upstream 2000 false Scaffold2515: 151627-153626 Capsella grandiflora
Cagra.2515s0050 2.0kb downstream 2.0kb downstream 2579 true Scaffold2515: 153627-156205 Capsella grandiflora
Cagra.2515s0050 2.0kb downstream 2.0kb downstream 2000 false Scaffold2515: 154206-156205 Capsella grandiflora
Cagra.2515s0050 5.0kb upstream 5.0kb upstream 5579 true Scaffold2515: 148627-154205 Capsella grandiflora
Cagra.2515s0050 5.0kb upstream 5.0kb upstream 5000 false Scaffold2515: 148627-153626 Capsella grandiflora
Cagra.2515s0050 5.0kb downstream 5.0kb downstream 5579 true Scaffold2515: 153627-159205 Capsella grandiflora
Cagra.2515s0050 5.0kb downstream 5.0kb downstream 5000 false Scaffold2515: 154206-159205 Capsella grandiflora
Cagra.2515s0050 10.0kb upstream 10.0kb upstream 10579 true Scaffold2515: 143627-154205 Capsella grandiflora
Cagra.2515s0050 10.0kb upstream 10.0kb upstream 10000 false Scaffold2515: 143627-153626 Capsella grandiflora
Cagra.2515s0050 10.0kb downstream 10.0kb downstream 10579 true Scaffold2515: 153627-164205 Capsella grandiflora
Cagra.2515s0050 10.0kb downstream 10.0kb downstream 10000 false Scaffold2515: 154206-164205 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369039 5261 Brassicaceae View MSA
123841077 5264 Brassicales-Malvales View MSA
124322836 5266 SBM View MSA
124245039 5268 Malvidae View MSA
124071232 5270 Rosid View MSA
123751751 5271 Pentapetalae View MSA
122797168 5272 Eudicot View MSA
122051477 5273 Angiosperm View MSA
123429175 5275 Viridiplantae View MSA
121350274 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain