Gene : Cagra.27001s0001 C. grandiflora v1.1
Genomic Order:  1 Name:  ? Cagra.27001s0001
Secondary Identifier:  ? PAC:28896575
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.27001s0001 0.5kb upstream 0.5kb upstream 678 true Scaffold27001: 1-678 Capsella grandiflora
Cagra.27001s0001 0.5kb upstream 0.5kb upstream 129 false Scaffold27001: 1-129 Capsella grandiflora
Cagra.27001s0001 0.5kb downstream 0.5kb downstream 1049 true Scaffold27001: 130-1178 Capsella grandiflora
Cagra.27001s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold27001: 679-1178 Capsella grandiflora
Cagra.27001s0001 1.0kb upstream 1.0kb upstream 678 true Scaffold27001: 1-678 Capsella grandiflora
Cagra.27001s0001 1.0kb upstream 1.0kb upstream 129 false Scaffold27001: 1-129 Capsella grandiflora
Cagra.27001s0001 1.0kb downstream 1.0kb downstream 1549 true Scaffold27001: 130-1678 Capsella grandiflora
Cagra.27001s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold27001: 679-1678 Capsella grandiflora
Cagra.27001s0001 2.0kb upstream 2.0kb upstream 678 true Scaffold27001: 1-678 Capsella grandiflora
Cagra.27001s0001 2.0kb upstream 2.0kb upstream 129 false Scaffold27001: 1-129 Capsella grandiflora
Cagra.27001s0001 2.0kb downstream 2.0kb downstream 1784 true Scaffold27001: 130-1913 Capsella grandiflora
Cagra.27001s0001 2.0kb downstream 2.0kb downstream 1235 false Scaffold27001: 679-1913 Capsella grandiflora
Cagra.27001s0001 5.0kb upstream 5.0kb upstream 678 true Scaffold27001: 1-678 Capsella grandiflora
Cagra.27001s0001 5.0kb upstream 5.0kb upstream 129 false Scaffold27001: 1-129 Capsella grandiflora
Cagra.27001s0001 5.0kb downstream 5.0kb downstream 1784 true Scaffold27001: 130-1913 Capsella grandiflora
Cagra.27001s0001 5.0kb downstream 5.0kb downstream 1235 false Scaffold27001: 679-1913 Capsella grandiflora
Cagra.27001s0001 10.0kb upstream 10.0kb upstream 678 true Scaffold27001: 1-678 Capsella grandiflora
Cagra.27001s0001 10.0kb upstream 10.0kb upstream 129 false Scaffold27001: 1-129 Capsella grandiflora
Cagra.27001s0001 10.0kb downstream 10.0kb downstream 1784 true Scaffold27001: 130-1913 Capsella grandiflora
Cagra.27001s0001 10.0kb downstream 10.0kb downstream 1235 false Scaffold27001: 679-1913 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361823 5261 Brassicaceae View MSA
123830754 5264 Brassicales-Malvales View MSA
124341226 5266 SBM View MSA
124244360 5268 Malvidae View MSA
124068689 5270 Rosid View MSA
123752807 5271 Pentapetalae View MSA
122789291 5272 Eudicot View MSA
122046039 5273 Angiosperm View MSA
121350637 5274 Embryophyte View MSA
123381830 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain