Gene : Cagra.2625s0028 C. grandiflora v1.1
Defline:  (1 of 4) PTHR14155:SF110 - RING/U-BOX DOMAIN-CONTAINING PROTEIN Genomic Order:  28
Name:  ? Cagra.2625s0028 Secondary Identifier:  ? PAC:28897182
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2625s0028 0.5kb upstream 0.5kb upstream 1407 true Scaffold2625: 101197-102603 Capsella grandiflora
Cagra.2625s0028 0.5kb upstream 0.5kb upstream 500 false Scaffold2625: 101197-101696 Capsella grandiflora
Cagra.2625s0028 0.5kb downstream 0.5kb downstream 1407 true Scaffold2625: 101697-103103 Capsella grandiflora
Cagra.2625s0028 0.5kb downstream 0.5kb downstream 500 false Scaffold2625: 102604-103103 Capsella grandiflora
Cagra.2625s0028 1.0kb upstream 1.0kb upstream 1907 true Scaffold2625: 100697-102603 Capsella grandiflora
Cagra.2625s0028 1.0kb upstream 1.0kb upstream 1000 false Scaffold2625: 100697-101696 Capsella grandiflora
Cagra.2625s0028 1.0kb downstream 1.0kb downstream 1907 true Scaffold2625: 101697-103603 Capsella grandiflora
Cagra.2625s0028 1.0kb downstream 1.0kb downstream 1000 false Scaffold2625: 102604-103603 Capsella grandiflora
Cagra.2625s0028 2.0kb upstream 2.0kb upstream 2907 true Scaffold2625: 99697-102603 Capsella grandiflora
Cagra.2625s0028 2.0kb upstream 2.0kb upstream 2000 false Scaffold2625: 99697-101696 Capsella grandiflora
Cagra.2625s0028 2.0kb downstream 2.0kb downstream 2907 true Scaffold2625: 101697-104603 Capsella grandiflora
Cagra.2625s0028 2.0kb downstream 2.0kb downstream 2000 false Scaffold2625: 102604-104603 Capsella grandiflora
Cagra.2625s0028 5.0kb upstream 5.0kb upstream 5907 true Scaffold2625: 96697-102603 Capsella grandiflora
Cagra.2625s0028 5.0kb upstream 5.0kb upstream 5000 false Scaffold2625: 96697-101696 Capsella grandiflora
Cagra.2625s0028 5.0kb downstream 5.0kb downstream 4198 true Scaffold2625: 101697-105894 Capsella grandiflora
Cagra.2625s0028 5.0kb downstream 5.0kb downstream 3291 false Scaffold2625: 102604-105894 Capsella grandiflora
Cagra.2625s0028 10.0kb upstream 10.0kb upstream 10907 true Scaffold2625: 91697-102603 Capsella grandiflora
Cagra.2625s0028 10.0kb upstream 10.0kb upstream 10000 false Scaffold2625: 91697-101696 Capsella grandiflora
Cagra.2625s0028 10.0kb downstream 10.0kb downstream 4198 true Scaffold2625: 101697-105894 Capsella grandiflora
Cagra.2625s0028 10.0kb downstream 10.0kb downstream 3291 false Scaffold2625: 102604-105894 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379091 5261 Brassicaceae View MSA
123828218 5264 Brassicales-Malvales View MSA
124345470 5266 SBM View MSA
124238832 5268 Malvidae View MSA
124062810 5270 Rosid View MSA
123750154 5271 Pentapetalae View MSA
122792700 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain