Gene : Cagra.2636s0015 C. grandiflora v1.1
Defline:  (1 of 2) PF10183 - ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) (ESSS) Genomic Order:  15
Name:  ? Cagra.2636s0015 Secondary Identifier:  ? PAC:28904998
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-3781 Capsella grandiflora pathologic  
Cgrandiflora PWY-4302 Capsella grandiflora pathologic  
Cgrandiflora PWY-5083 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2636s0015 0.5kb upstream 0.5kb upstream 1158 true Scaffold2636: 48519-49676 Capsella grandiflora
Cagra.2636s0015 0.5kb upstream 0.5kb upstream 500 false Scaffold2636: 48519-49018 Capsella grandiflora
Cagra.2636s0015 0.5kb downstream 0.5kb downstream 1158 true Scaffold2636: 49019-50176 Capsella grandiflora
Cagra.2636s0015 0.5kb downstream 0.5kb downstream 500 false Scaffold2636: 49677-50176 Capsella grandiflora
Cagra.2636s0015 1.0kb upstream 1.0kb upstream 1658 true Scaffold2636: 48019-49676 Capsella grandiflora
Cagra.2636s0015 1.0kb upstream 1.0kb upstream 1000 false Scaffold2636: 48019-49018 Capsella grandiflora
Cagra.2636s0015 1.0kb downstream 1.0kb downstream 1658 true Scaffold2636: 49019-50676 Capsella grandiflora
Cagra.2636s0015 1.0kb downstream 1.0kb downstream 1000 false Scaffold2636: 49677-50676 Capsella grandiflora
Cagra.2636s0015 2.0kb upstream 2.0kb upstream 2658 true Scaffold2636: 47019-49676 Capsella grandiflora
Cagra.2636s0015 2.0kb upstream 2.0kb upstream 2000 false Scaffold2636: 47019-49018 Capsella grandiflora
Cagra.2636s0015 2.0kb downstream 2.0kb downstream 2658 true Scaffold2636: 49019-51676 Capsella grandiflora
Cagra.2636s0015 2.0kb downstream 2.0kb downstream 2000 false Scaffold2636: 49677-51676 Capsella grandiflora
Cagra.2636s0015 5.0kb upstream 5.0kb upstream 5658 true Scaffold2636: 44019-49676 Capsella grandiflora
Cagra.2636s0015 5.0kb upstream 5.0kb upstream 5000 false Scaffold2636: 44019-49018 Capsella grandiflora
Cagra.2636s0015 5.0kb downstream 5.0kb downstream 5658 true Scaffold2636: 49019-54676 Capsella grandiflora
Cagra.2636s0015 5.0kb downstream 5.0kb downstream 5000 false Scaffold2636: 49677-54676 Capsella grandiflora
Cagra.2636s0015 10.0kb upstream 10.0kb upstream 10658 true Scaffold2636: 39019-49676 Capsella grandiflora
Cagra.2636s0015 10.0kb upstream 10.0kb upstream 10000 false Scaffold2636: 39019-49018 Capsella grandiflora
Cagra.2636s0015 10.0kb downstream 10.0kb downstream 10658 true Scaffold2636: 49019-59676 Capsella grandiflora
Cagra.2636s0015 10.0kb downstream 10.0kb downstream 10000 false Scaffold2636: 49677-59676 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369748 5261 Brassicaceae View MSA
123840771 5264 Brassicales-Malvales View MSA
124322782 5266 SBM View MSA
124253115 5268 Malvidae View MSA
124061504 5270 Rosid View MSA
123740259 5271 Pentapetalae View MSA
122791906 5272 Eudicot View MSA
122042658 5273 Angiosperm View MSA
121346631 5274 Embryophyte View MSA
123428408 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain