Gene : Cagra.2925s0033 C. grandiflora v1.1
Defline:  (1 of 46) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) Genomic Order:  33
Name:  ? Cagra.2925s0033 Secondary Identifier:  ? PAC:28896678
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2925s0033 0.5kb upstream 0.5kb upstream 1250 true Scaffold2925: 127849-129098 Capsella grandiflora
Cagra.2925s0033 0.5kb upstream 0.5kb upstream 500 false Scaffold2925: 128599-129098 Capsella grandiflora
Cagra.2925s0033 0.5kb downstream 0.5kb downstream 1250 true Scaffold2925: 127349-128598 Capsella grandiflora
Cagra.2925s0033 0.5kb downstream 0.5kb downstream 500 false Scaffold2925: 127349-127848 Capsella grandiflora
Cagra.2925s0033 1.0kb upstream 1.0kb upstream 1750 true Scaffold2925: 127849-129598 Capsella grandiflora
Cagra.2925s0033 1.0kb upstream 1.0kb upstream 1000 false Scaffold2925: 128599-129598 Capsella grandiflora
Cagra.2925s0033 1.0kb downstream 1.0kb downstream 1750 true Scaffold2925: 126849-128598 Capsella grandiflora
Cagra.2925s0033 1.0kb downstream 1.0kb downstream 1000 false Scaffold2925: 126849-127848 Capsella grandiflora
Cagra.2925s0033 2.0kb upstream 2.0kb upstream 2750 true Scaffold2925: 127849-130598 Capsella grandiflora
Cagra.2925s0033 2.0kb upstream 2.0kb upstream 2000 false Scaffold2925: 128599-130598 Capsella grandiflora
Cagra.2925s0033 2.0kb downstream 2.0kb downstream 2750 true Scaffold2925: 125849-128598 Capsella grandiflora
Cagra.2925s0033 2.0kb downstream 2.0kb downstream 2000 false Scaffold2925: 125849-127848 Capsella grandiflora
Cagra.2925s0033 5.0kb upstream 5.0kb upstream 5750 true Scaffold2925: 127849-133598 Capsella grandiflora
Cagra.2925s0033 5.0kb upstream 5.0kb upstream 5000 false Scaffold2925: 128599-133598 Capsella grandiflora
Cagra.2925s0033 5.0kb downstream 5.0kb downstream 5750 true Scaffold2925: 122849-128598 Capsella grandiflora
Cagra.2925s0033 5.0kb downstream 5.0kb downstream 5000 false Scaffold2925: 122849-127848 Capsella grandiflora
Cagra.2925s0033 10.0kb upstream 10.0kb upstream 10750 true Scaffold2925: 127849-138598 Capsella grandiflora
Cagra.2925s0033 10.0kb upstream 10.0kb upstream 10000 false Scaffold2925: 128599-138598 Capsella grandiflora
Cagra.2925s0033 10.0kb downstream 10.0kb downstream 10750 true Scaffold2925: 117849-128598 Capsella grandiflora
Cagra.2925s0033 10.0kb downstream 10.0kb downstream 10000 false Scaffold2925: 117849-127848 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367490 5261 Brassicaceae View MSA
123834172 5264 Brassicales-Malvales View MSA
124337687 5266 SBM View MSA
124244497 5268 Malvidae View MSA
124066464 5270 Rosid View MSA
123752127 5271 Pentapetalae View MSA
122796629 5272 Eudicot View MSA
122048745 5273 Angiosperm View MSA
123429052 5275 Viridiplantae View MSA
121351105 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain