Gene : Cagra.2848s0007 C. grandiflora v1.1
Defline:  (1 of 4) PTHR10015:SF162 - HEAT STRESS TRANSCRIPTION FACTOR A-1A-RELATED Genomic Order:  7
Name:  ? Cagra.2848s0007 Secondary Identifier:  ? PAC:28919656
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2848s0007 0.5kb upstream 0.5kb upstream 995 true Scaffold2848: 26415-27409 Capsella grandiflora
Cagra.2848s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold2848: 26415-26914 Capsella grandiflora
Cagra.2848s0007 0.5kb downstream 0.5kb downstream 995 true Scaffold2848: 26915-27909 Capsella grandiflora
Cagra.2848s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold2848: 27410-27909 Capsella grandiflora
Cagra.2848s0007 1.0kb upstream 1.0kb upstream 1495 true Scaffold2848: 25915-27409 Capsella grandiflora
Cagra.2848s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold2848: 25915-26914 Capsella grandiflora
Cagra.2848s0007 1.0kb downstream 1.0kb downstream 1495 true Scaffold2848: 26915-28409 Capsella grandiflora
Cagra.2848s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold2848: 27410-28409 Capsella grandiflora
Cagra.2848s0007 2.0kb upstream 2.0kb upstream 2495 true Scaffold2848: 24915-27409 Capsella grandiflora
Cagra.2848s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold2848: 24915-26914 Capsella grandiflora
Cagra.2848s0007 2.0kb downstream 2.0kb downstream 2495 true Scaffold2848: 26915-29409 Capsella grandiflora
Cagra.2848s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold2848: 27410-29409 Capsella grandiflora
Cagra.2848s0007 5.0kb upstream 5.0kb upstream 5495 true Scaffold2848: 21915-27409 Capsella grandiflora
Cagra.2848s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold2848: 21915-26914 Capsella grandiflora
Cagra.2848s0007 5.0kb downstream 5.0kb downstream 5495 true Scaffold2848: 26915-32409 Capsella grandiflora
Cagra.2848s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold2848: 27410-32409 Capsella grandiflora
Cagra.2848s0007 10.0kb upstream 10.0kb upstream 10495 true Scaffold2848: 16915-27409 Capsella grandiflora
Cagra.2848s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold2848: 16915-26914 Capsella grandiflora
Cagra.2848s0007 10.0kb downstream 10.0kb downstream 10495 true Scaffold2848: 26915-37409 Capsella grandiflora
Cagra.2848s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold2848: 27410-37409 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380787 5261 Brassicaceae View MSA
123802904 5264 Brassicales-Malvales View MSA
124300060 5266 SBM View MSA
124151332 5268 Malvidae View MSA
124074457 5270 Rosid View MSA
123749561 5271 Pentapetalae View MSA
122794562 5272 Eudicot View MSA
122050286 5273 Angiosperm View MSA
121349623 5274 Embryophyte View MSA
123428852 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain