Gene : Cagra.30289s0001 C. grandiflora v1.1
Defline:  (1 of 5) PTHR31301:SF5 - LOB DOMAIN-CONTAINING PROTEIN 10-RELATED Genomic Order:  1
Name:  ? Cagra.30289s0001 Secondary Identifier:  ? PAC:28915514
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.30289s0001 0.5kb upstream 0.5kb upstream 1010 true Scaffold30289: 13-1022 Capsella grandiflora
Cagra.30289s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold30289: 13-512 Capsella grandiflora
Cagra.30289s0001 0.5kb downstream 0.5kb downstream 517 true Scaffold30289: 513-1029 Capsella grandiflora
Cagra.30289s0001 0.5kb downstream 0.5kb downstream 7 false Scaffold30289: 1023-1029 Capsella grandiflora
Cagra.30289s0001 1.0kb upstream 1.0kb upstream 1022 true Scaffold30289: 1-1022 Capsella grandiflora
Cagra.30289s0001 1.0kb upstream 1.0kb upstream 512 false Scaffold30289: 1-512 Capsella grandiflora
Cagra.30289s0001 1.0kb downstream 1.0kb downstream 517 true Scaffold30289: 513-1029 Capsella grandiflora
Cagra.30289s0001 1.0kb downstream 1.0kb downstream 7 false Scaffold30289: 1023-1029 Capsella grandiflora
Cagra.30289s0001 2.0kb upstream 2.0kb upstream 1022 true Scaffold30289: 1-1022 Capsella grandiflora
Cagra.30289s0001 2.0kb upstream 2.0kb upstream 512 false Scaffold30289: 1-512 Capsella grandiflora
Cagra.30289s0001 2.0kb downstream 2.0kb downstream 517 true Scaffold30289: 513-1029 Capsella grandiflora
Cagra.30289s0001 2.0kb downstream 2.0kb downstream 7 false Scaffold30289: 1023-1029 Capsella grandiflora
Cagra.30289s0001 5.0kb upstream 5.0kb upstream 1022 true Scaffold30289: 1-1022 Capsella grandiflora
Cagra.30289s0001 5.0kb upstream 5.0kb upstream 512 false Scaffold30289: 1-512 Capsella grandiflora
Cagra.30289s0001 5.0kb downstream 5.0kb downstream 517 true Scaffold30289: 513-1029 Capsella grandiflora
Cagra.30289s0001 5.0kb downstream 5.0kb downstream 7 false Scaffold30289: 1023-1029 Capsella grandiflora
Cagra.30289s0001 10.0kb upstream 10.0kb upstream 1022 true Scaffold30289: 1-1022 Capsella grandiflora
Cagra.30289s0001 10.0kb upstream 10.0kb upstream 512 false Scaffold30289: 1-512 Capsella grandiflora
Cagra.30289s0001 10.0kb downstream 10.0kb downstream 517 true Scaffold30289: 513-1029 Capsella grandiflora
Cagra.30289s0001 10.0kb downstream 10.0kb downstream 7 false Scaffold30289: 1023-1029 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380519 5261 Brassicaceae View MSA
123802760 5264 Brassicales-Malvales View MSA
124299927 5266 SBM View MSA
124255624 5268 Malvidae View MSA
124072898 5270 Rosid View MSA
123752210 5271 Pentapetalae View MSA
122796223 5272 Eudicot View MSA
122048133 5273 Angiosperm View MSA
121350574 5274 Embryophyte View MSA
123381803 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain