Gene : Cagra.3055s0010 C. grandiflora v1.1
Defline:  (1 of 1) PTHR18901//PTHR18901:SF4 - 2-DEOXYGLUCOSE-6-PHOSPHATE PHOSPHATASE 2 Genomic Order:  10
Name:  ? Cagra.3055s0010 Secondary Identifier:  ? PAC:28896868
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY66-399 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3055s0010 0.5kb upstream 0.5kb upstream 2149 true Scaffold3055: 31629-33777 Capsella grandiflora
Cagra.3055s0010 0.5kb upstream 0.5kb upstream 500 false Scaffold3055: 31629-32128 Capsella grandiflora
Cagra.3055s0010 0.5kb downstream 0.5kb downstream 2149 true Scaffold3055: 32129-34277 Capsella grandiflora
Cagra.3055s0010 0.5kb downstream 0.5kb downstream 500 false Scaffold3055: 33778-34277 Capsella grandiflora
Cagra.3055s0010 1.0kb upstream 1.0kb upstream 2649 true Scaffold3055: 31129-33777 Capsella grandiflora
Cagra.3055s0010 1.0kb upstream 1.0kb upstream 1000 false Scaffold3055: 31129-32128 Capsella grandiflora
Cagra.3055s0010 1.0kb downstream 1.0kb downstream 2649 true Scaffold3055: 32129-34777 Capsella grandiflora
Cagra.3055s0010 1.0kb downstream 1.0kb downstream 1000 false Scaffold3055: 33778-34777 Capsella grandiflora
Cagra.3055s0010 2.0kb upstream 2.0kb upstream 3649 true Scaffold3055: 30129-33777 Capsella grandiflora
Cagra.3055s0010 2.0kb upstream 2.0kb upstream 2000 false Scaffold3055: 30129-32128 Capsella grandiflora
Cagra.3055s0010 2.0kb downstream 2.0kb downstream 3649 true Scaffold3055: 32129-35777 Capsella grandiflora
Cagra.3055s0010 2.0kb downstream 2.0kb downstream 2000 false Scaffold3055: 33778-35777 Capsella grandiflora
Cagra.3055s0010 5.0kb upstream 5.0kb upstream 6649 true Scaffold3055: 27129-33777 Capsella grandiflora
Cagra.3055s0010 5.0kb upstream 5.0kb upstream 5000 false Scaffold3055: 27129-32128 Capsella grandiflora
Cagra.3055s0010 5.0kb downstream 5.0kb downstream 6649 true Scaffold3055: 32129-38777 Capsella grandiflora
Cagra.3055s0010 5.0kb downstream 5.0kb downstream 5000 false Scaffold3055: 33778-38777 Capsella grandiflora
Cagra.3055s0010 10.0kb upstream 10.0kb upstream 11649 true Scaffold3055: 22129-33777 Capsella grandiflora
Cagra.3055s0010 10.0kb upstream 10.0kb upstream 10000 false Scaffold3055: 22129-32128 Capsella grandiflora
Cagra.3055s0010 10.0kb downstream 10.0kb downstream 11649 true Scaffold3055: 32129-43777 Capsella grandiflora
Cagra.3055s0010 10.0kb downstream 10.0kb downstream 10000 false Scaffold3055: 33778-43777 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373390 5261 Brassicaceae View MSA
123831831 5264 Brassicales-Malvales View MSA
124340332 5266 SBM View MSA
124236950 5268 Malvidae View MSA
124061281 5270 Rosid View MSA
123738035 5271 Pentapetalae View MSA
122792666 5272 Eudicot View MSA
122045003 5273 Angiosperm View MSA
121344418 5274 Embryophyte View MSA
123426092 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain