Gene : Cagra.0084s0003 C. grandiflora v1.1
Genomic Order:  3 Name:  ? Cagra.0084s0003
Secondary Identifier:  ? PAC:28895359
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0084s0003 0.5kb upstream 0.5kb upstream 1528 true Scaffold84: 5986-7513 Capsella grandiflora
Cagra.0084s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold84: 7014-7513 Capsella grandiflora
Cagra.0084s0003 0.5kb downstream 0.5kb downstream 1528 true Scaffold84: 5486-7013 Capsella grandiflora
Cagra.0084s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold84: 5486-5985 Capsella grandiflora
Cagra.0084s0003 1.0kb upstream 1.0kb upstream 2028 true Scaffold84: 5986-8013 Capsella grandiflora
Cagra.0084s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold84: 7014-8013 Capsella grandiflora
Cagra.0084s0003 1.0kb downstream 1.0kb downstream 2028 true Scaffold84: 4986-7013 Capsella grandiflora
Cagra.0084s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold84: 4986-5985 Capsella grandiflora
Cagra.0084s0003 2.0kb upstream 2.0kb upstream 3028 true Scaffold84: 5986-9013 Capsella grandiflora
Cagra.0084s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold84: 7014-9013 Capsella grandiflora
Cagra.0084s0003 2.0kb downstream 2.0kb downstream 3028 true Scaffold84: 3986-7013 Capsella grandiflora
Cagra.0084s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold84: 3986-5985 Capsella grandiflora
Cagra.0084s0003 5.0kb upstream 5.0kb upstream 6028 true Scaffold84: 5986-12013 Capsella grandiflora
Cagra.0084s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold84: 7014-12013 Capsella grandiflora
Cagra.0084s0003 5.0kb downstream 5.0kb downstream 6028 true Scaffold84: 986-7013 Capsella grandiflora
Cagra.0084s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold84: 986-5985 Capsella grandiflora
Cagra.0084s0003 10.0kb upstream 10.0kb upstream 11028 true Scaffold84: 5986-17013 Capsella grandiflora
Cagra.0084s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold84: 7014-17013 Capsella grandiflora
Cagra.0084s0003 10.0kb downstream 10.0kb downstream 7013 true Scaffold84: 1-7013 Capsella grandiflora
Cagra.0084s0003 10.0kb downstream 10.0kb downstream 5985 false Scaffold84: 1-5985 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379881 5261 Brassicaceae View MSA
123802460 5264 Brassicales-Malvales View MSA
124299654 5266 SBM View MSA
124253683 5268 Malvidae View MSA
124064876 5270 Rosid View MSA
123742190 5271 Pentapetalae View MSA
122791015 5272 Eudicot View MSA
122047689 5273 Angiosperm View MSA
121310779 5274 Embryophyte View MSA
123348183 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain