Gene : Cagra.0084s0022 C. grandiflora v1.1
Defline:  (1 of 2) PF11947 - Protein of unknown function (DUF3464) (DUF3464) Genomic Order:  22
Name:  ? Cagra.0084s0022 Secondary Identifier:  ? PAC:28895386
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0084s0022 0.5kb upstream 0.5kb upstream 1007 true Scaffold84: 79986-80992 Capsella grandiflora
Cagra.0084s0022 0.5kb upstream 0.5kb upstream 500 false Scaffold84: 80493-80992 Capsella grandiflora
Cagra.0084s0022 0.5kb downstream 0.5kb downstream 1007 true Scaffold84: 79486-80492 Capsella grandiflora
Cagra.0084s0022 0.5kb downstream 0.5kb downstream 500 false Scaffold84: 79486-79985 Capsella grandiflora
Cagra.0084s0022 1.0kb upstream 1.0kb upstream 1507 true Scaffold84: 79986-81492 Capsella grandiflora
Cagra.0084s0022 1.0kb upstream 1.0kb upstream 1000 false Scaffold84: 80493-81492 Capsella grandiflora
Cagra.0084s0022 1.0kb downstream 1.0kb downstream 1507 true Scaffold84: 78986-80492 Capsella grandiflora
Cagra.0084s0022 1.0kb downstream 1.0kb downstream 1000 false Scaffold84: 78986-79985 Capsella grandiflora
Cagra.0084s0022 2.0kb upstream 2.0kb upstream 2507 true Scaffold84: 79986-82492 Capsella grandiflora
Cagra.0084s0022 2.0kb upstream 2.0kb upstream 2000 false Scaffold84: 80493-82492 Capsella grandiflora
Cagra.0084s0022 2.0kb downstream 2.0kb downstream 2507 true Scaffold84: 77986-80492 Capsella grandiflora
Cagra.0084s0022 2.0kb downstream 2.0kb downstream 2000 false Scaffold84: 77986-79985 Capsella grandiflora
Cagra.0084s0022 5.0kb upstream 5.0kb upstream 5507 true Scaffold84: 79986-85492 Capsella grandiflora
Cagra.0084s0022 5.0kb upstream 5.0kb upstream 5000 false Scaffold84: 80493-85492 Capsella grandiflora
Cagra.0084s0022 5.0kb downstream 5.0kb downstream 5507 true Scaffold84: 74986-80492 Capsella grandiflora
Cagra.0084s0022 5.0kb downstream 5.0kb downstream 5000 false Scaffold84: 74986-79985 Capsella grandiflora
Cagra.0084s0022 10.0kb upstream 10.0kb upstream 10507 true Scaffold84: 79986-90492 Capsella grandiflora
Cagra.0084s0022 10.0kb upstream 10.0kb upstream 10000 false Scaffold84: 80493-90492 Capsella grandiflora
Cagra.0084s0022 10.0kb downstream 10.0kb downstream 10507 true Scaffold84: 69986-80492 Capsella grandiflora
Cagra.0084s0022 10.0kb downstream 10.0kb downstream 10000 false Scaffold84: 69986-79985 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373059 5261 Brassicaceae View MSA
123830948 5264 Brassicales-Malvales View MSA
124340609 5266 SBM View MSA
124242154 5268 Malvidae View MSA
124067243 5270 Rosid View MSA
123738639 5271 Pentapetalae View MSA
122792645 5272 Eudicot View MSA
122046649 5273 Angiosperm View MSA
121348094 5274 Embryophyte View MSA
123428537 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain