Gene : Cagra.0003s0039 C. grandiflora v1.1
Defline:  (1 of 21) PF08137 - DVL family (DVL) Genomic Order:  39
Name:  ? Cagra.0003s0039 Secondary Identifier:  ? PAC:28913336
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0003s0039 0.5kb upstream 0.5kb upstream 728 true Scaffold3: 128495-129222 Capsella grandiflora
Cagra.0003s0039 0.5kb upstream 0.5kb upstream 500 false Scaffold3: 128723-129222 Capsella grandiflora
Cagra.0003s0039 0.5kb downstream 0.5kb downstream 728 true Scaffold3: 127995-128722 Capsella grandiflora
Cagra.0003s0039 0.5kb downstream 0.5kb downstream 500 false Scaffold3: 127995-128494 Capsella grandiflora
Cagra.0003s0039 1.0kb upstream 1.0kb upstream 1228 true Scaffold3: 128495-129722 Capsella grandiflora
Cagra.0003s0039 1.0kb upstream 1.0kb upstream 1000 false Scaffold3: 128723-129722 Capsella grandiflora
Cagra.0003s0039 1.0kb downstream 1.0kb downstream 1228 true Scaffold3: 127495-128722 Capsella grandiflora
Cagra.0003s0039 1.0kb downstream 1.0kb downstream 1000 false Scaffold3: 127495-128494 Capsella grandiflora
Cagra.0003s0039 2.0kb upstream 2.0kb upstream 2228 true Scaffold3: 128495-130722 Capsella grandiflora
Cagra.0003s0039 2.0kb upstream 2.0kb upstream 2000 false Scaffold3: 128723-130722 Capsella grandiflora
Cagra.0003s0039 2.0kb downstream 2.0kb downstream 2228 true Scaffold3: 126495-128722 Capsella grandiflora
Cagra.0003s0039 2.0kb downstream 2.0kb downstream 2000 false Scaffold3: 126495-128494 Capsella grandiflora
Cagra.0003s0039 5.0kb upstream 5.0kb upstream 5228 true Scaffold3: 128495-133722 Capsella grandiflora
Cagra.0003s0039 5.0kb upstream 5.0kb upstream 5000 false Scaffold3: 128723-133722 Capsella grandiflora
Cagra.0003s0039 5.0kb downstream 5.0kb downstream 5228 true Scaffold3: 123495-128722 Capsella grandiflora
Cagra.0003s0039 5.0kb downstream 5.0kb downstream 5000 false Scaffold3: 123495-128494 Capsella grandiflora
Cagra.0003s0039 10.0kb upstream 10.0kb upstream 10228 true Scaffold3: 128495-138722 Capsella grandiflora
Cagra.0003s0039 10.0kb upstream 10.0kb upstream 10000 false Scaffold3: 128723-138722 Capsella grandiflora
Cagra.0003s0039 10.0kb downstream 10.0kb downstream 10228 true Scaffold3: 118495-128722 Capsella grandiflora
Cagra.0003s0039 10.0kb downstream 10.0kb downstream 10000 false Scaffold3: 118495-128494 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368769 5261 Brassicaceae View MSA
123799651 5264 Brassicales-Malvales View MSA
124297150 5266 SBM View MSA
124149110 5268 Malvidae View MSA
123874981 5270 Rosid View MSA
123458874 5271 Pentapetalae View MSA
122797948 5272 Eudicot View MSA
122048565 5273 Angiosperm View MSA
121346075 5274 Embryophyte View MSA
123380321 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain