Gene : Cagra.0007s0072 C. grandiflora v1.1
Defline:  (1 of 33) PF05678 - VQ motif (VQ) Genomic Order:  72
Name:  ? Cagra.0007s0072 Secondary Identifier:  ? PAC:28903146
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0007s0072 0.5kb upstream 0.5kb upstream 1130 true Scaffold7: 252117-253246 Capsella grandiflora
Cagra.0007s0072 0.5kb upstream 0.5kb upstream 500 false Scaffold7: 252747-253246 Capsella grandiflora
Cagra.0007s0072 0.5kb downstream 0.5kb downstream 1130 true Scaffold7: 251617-252746 Capsella grandiflora
Cagra.0007s0072 0.5kb downstream 0.5kb downstream 500 false Scaffold7: 251617-252116 Capsella grandiflora
Cagra.0007s0072 1.0kb upstream 1.0kb upstream 1630 true Scaffold7: 252117-253746 Capsella grandiflora
Cagra.0007s0072 1.0kb upstream 1.0kb upstream 1000 false Scaffold7: 252747-253746 Capsella grandiflora
Cagra.0007s0072 1.0kb downstream 1.0kb downstream 1630 true Scaffold7: 251117-252746 Capsella grandiflora
Cagra.0007s0072 1.0kb downstream 1.0kb downstream 1000 false Scaffold7: 251117-252116 Capsella grandiflora
Cagra.0007s0072 2.0kb upstream 2.0kb upstream 2630 true Scaffold7: 252117-254746 Capsella grandiflora
Cagra.0007s0072 2.0kb upstream 2.0kb upstream 2000 false Scaffold7: 252747-254746 Capsella grandiflora
Cagra.0007s0072 2.0kb downstream 2.0kb downstream 2630 true Scaffold7: 250117-252746 Capsella grandiflora
Cagra.0007s0072 2.0kb downstream 2.0kb downstream 2000 false Scaffold7: 250117-252116 Capsella grandiflora
Cagra.0007s0072 5.0kb upstream 5.0kb upstream 5630 true Scaffold7: 252117-257746 Capsella grandiflora
Cagra.0007s0072 5.0kb upstream 5.0kb upstream 5000 false Scaffold7: 252747-257746 Capsella grandiflora
Cagra.0007s0072 5.0kb downstream 5.0kb downstream 5630 true Scaffold7: 247117-252746 Capsella grandiflora
Cagra.0007s0072 5.0kb downstream 5.0kb downstream 5000 false Scaffold7: 247117-252116 Capsella grandiflora
Cagra.0007s0072 10.0kb upstream 10.0kb upstream 10630 true Scaffold7: 252117-262746 Capsella grandiflora
Cagra.0007s0072 10.0kb upstream 10.0kb upstream 10000 false Scaffold7: 252747-262746 Capsella grandiflora
Cagra.0007s0072 10.0kb downstream 10.0kb downstream 10630 true Scaffold7: 242117-252746 Capsella grandiflora
Cagra.0007s0072 10.0kb downstream 10.0kb downstream 10000 false Scaffold7: 242117-252116 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370332 5261 Brassicaceae View MSA
123799942 5264 Brassicales-Malvales View MSA
124297410 5266 SBM View MSA
124252268 5268 Malvidae View MSA
124073802 5270 Rosid View MSA
123750842 5271 Pentapetalae View MSA
122795090 5272 Eudicot View MSA
122046673 5273 Angiosperm View MSA
121347985 5274 Embryophyte View MSA
123380701 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain