Gene : Cagra.29687s0001 C. grandiflora v1.1
Defline:  (1 of 42) PTHR32133:SF127 - F-BOX ASSOCIATED UBIQUITINATION EFFECTOR FAMILY PROTEIN-RELATED Genomic Order:  1
Name:  ? Cagra.29687s0001 Secondary Identifier:  ? PAC:28896011
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.29687s0001 0.5kb upstream 0.5kb upstream 854 true Scaffold29687: 168-1021 Capsella grandiflora
Cagra.29687s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold29687: 168-667 Capsella grandiflora
Cagra.29687s0001 0.5kb downstream 0.5kb downstream 401 true Scaffold29687: 668-1068 Capsella grandiflora
Cagra.29687s0001 0.5kb downstream 0.5kb downstream 47 false Scaffold29687: 1022-1068 Capsella grandiflora
Cagra.29687s0001 1.0kb upstream 1.0kb upstream 1021 true Scaffold29687: 1-1021 Capsella grandiflora
Cagra.29687s0001 1.0kb upstream 1.0kb upstream 667 false Scaffold29687: 1-667 Capsella grandiflora
Cagra.29687s0001 1.0kb downstream 1.0kb downstream 401 true Scaffold29687: 668-1068 Capsella grandiflora
Cagra.29687s0001 1.0kb downstream 1.0kb downstream 47 false Scaffold29687: 1022-1068 Capsella grandiflora
Cagra.29687s0001 2.0kb upstream 2.0kb upstream 1021 true Scaffold29687: 1-1021 Capsella grandiflora
Cagra.29687s0001 2.0kb upstream 2.0kb upstream 667 false Scaffold29687: 1-667 Capsella grandiflora
Cagra.29687s0001 2.0kb downstream 2.0kb downstream 401 true Scaffold29687: 668-1068 Capsella grandiflora
Cagra.29687s0001 2.0kb downstream 2.0kb downstream 47 false Scaffold29687: 1022-1068 Capsella grandiflora
Cagra.29687s0001 5.0kb upstream 5.0kb upstream 1021 true Scaffold29687: 1-1021 Capsella grandiflora
Cagra.29687s0001 5.0kb upstream 5.0kb upstream 667 false Scaffold29687: 1-667 Capsella grandiflora
Cagra.29687s0001 5.0kb downstream 5.0kb downstream 401 true Scaffold29687: 668-1068 Capsella grandiflora
Cagra.29687s0001 5.0kb downstream 5.0kb downstream 47 false Scaffold29687: 1022-1068 Capsella grandiflora
Cagra.29687s0001 10.0kb upstream 10.0kb upstream 1021 true Scaffold29687: 1-1021 Capsella grandiflora
Cagra.29687s0001 10.0kb upstream 10.0kb upstream 667 false Scaffold29687: 1-667 Capsella grandiflora
Cagra.29687s0001 10.0kb downstream 10.0kb downstream 401 true Scaffold29687: 668-1068 Capsella grandiflora
Cagra.29687s0001 10.0kb downstream 10.0kb downstream 47 false Scaffold29687: 1022-1068 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121496502 5273 Angiosperm Singleton cluster - no MSA
122333450 5261 Brassicaceae Singleton cluster - no MSA
123774393 5264 Brassicales-Malvales Singleton cluster - no MSA
124272833 5266 SBM Singleton cluster - no MSA
124128582 5268 Malvidae Singleton cluster - no MSA
123857269 5270 Rosid Singleton cluster - no MSA
123443102 5271 Pentapetalae Singleton cluster - no MSA
122478672 5272 Eudicot Singleton cluster - no MSA
120769863 5274 Embryophyte Singleton cluster - no MSA
122812231 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain