Gene : Cagra.2969s0005 C. grandiflora v1.1
Defline:  (1 of 2) PTHR22904//PTHR22904:SF381 - TPR REPEAT CONTAINING PROTEIN Genomic Order:  5
Name:  ? Cagra.2969s0005 Secondary Identifier:  ? PAC:28909869
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2969s0005 0.5kb upstream 0.5kb upstream 2273 true Scaffold2969: 19423-21695 Capsella grandiflora
Cagra.2969s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold2969: 21196-21695 Capsella grandiflora
Cagra.2969s0005 0.5kb downstream 0.5kb downstream 2273 true Scaffold2969: 18923-21195 Capsella grandiflora
Cagra.2969s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold2969: 18923-19422 Capsella grandiflora
Cagra.2969s0005 1.0kb upstream 1.0kb upstream 2773 true Scaffold2969: 19423-22195 Capsella grandiflora
Cagra.2969s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold2969: 21196-22195 Capsella grandiflora
Cagra.2969s0005 1.0kb downstream 1.0kb downstream 2773 true Scaffold2969: 18423-21195 Capsella grandiflora
Cagra.2969s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold2969: 18423-19422 Capsella grandiflora
Cagra.2969s0005 2.0kb upstream 2.0kb upstream 3773 true Scaffold2969: 19423-23195 Capsella grandiflora
Cagra.2969s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold2969: 21196-23195 Capsella grandiflora
Cagra.2969s0005 2.0kb downstream 2.0kb downstream 3773 true Scaffold2969: 17423-21195 Capsella grandiflora
Cagra.2969s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold2969: 17423-19422 Capsella grandiflora
Cagra.2969s0005 5.0kb upstream 5.0kb upstream 6773 true Scaffold2969: 19423-26195 Capsella grandiflora
Cagra.2969s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold2969: 21196-26195 Capsella grandiflora
Cagra.2969s0005 5.0kb downstream 5.0kb downstream 6773 true Scaffold2969: 14423-21195 Capsella grandiflora
Cagra.2969s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold2969: 14423-19422 Capsella grandiflora
Cagra.2969s0005 10.0kb upstream 10.0kb upstream 11773 true Scaffold2969: 19423-31195 Capsella grandiflora
Cagra.2969s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold2969: 21196-31195 Capsella grandiflora
Cagra.2969s0005 10.0kb downstream 10.0kb downstream 11773 true Scaffold2969: 9423-21195 Capsella grandiflora
Cagra.2969s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold2969: 9423-19422 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041067 5273 Angiosperm View MSA
122361460 5261 Brassicaceae View MSA
123828391 5264 Brassicales-Malvales View MSA
124346418 5266 SBM View MSA
124247787 5268 Malvidae View MSA
124070249 5270 Rosid View MSA
123737389 5271 Pentapetalae View MSA
122790408 5272 Eudicot View MSA
121347266 5274 Embryophyte View MSA
123380522 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain