Gene : Cagra.0004s0011 C. grandiflora v1.1
Defline:  (1 of 137) PTHR31790:SF10 - F-BOX ASSOCIATED UBIQUITINATION EFFECTOR FAMILY PROTEIN-RELATED Genomic Order:  11
Name:  ? Cagra.0004s0011 Secondary Identifier:  ? PAC:28916016
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0004s0011 0.5kb upstream 0.5kb upstream 1454 true Scaffold4: 37367-38820 Capsella grandiflora
Cagra.0004s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold4: 38321-38820 Capsella grandiflora
Cagra.0004s0011 0.5kb downstream 0.5kb downstream 1454 true Scaffold4: 36867-38320 Capsella grandiflora
Cagra.0004s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold4: 36867-37366 Capsella grandiflora
Cagra.0004s0011 1.0kb upstream 1.0kb upstream 1954 true Scaffold4: 37367-39320 Capsella grandiflora
Cagra.0004s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold4: 38321-39320 Capsella grandiflora
Cagra.0004s0011 1.0kb downstream 1.0kb downstream 1954 true Scaffold4: 36367-38320 Capsella grandiflora
Cagra.0004s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold4: 36367-37366 Capsella grandiflora
Cagra.0004s0011 2.0kb upstream 2.0kb upstream 2954 true Scaffold4: 37367-40320 Capsella grandiflora
Cagra.0004s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold4: 38321-40320 Capsella grandiflora
Cagra.0004s0011 2.0kb downstream 2.0kb downstream 2954 true Scaffold4: 35367-38320 Capsella grandiflora
Cagra.0004s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold4: 35367-37366 Capsella grandiflora
Cagra.0004s0011 5.0kb upstream 5.0kb upstream 5954 true Scaffold4: 37367-43320 Capsella grandiflora
Cagra.0004s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold4: 38321-43320 Capsella grandiflora
Cagra.0004s0011 5.0kb downstream 5.0kb downstream 5954 true Scaffold4: 32367-38320 Capsella grandiflora
Cagra.0004s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold4: 32367-37366 Capsella grandiflora
Cagra.0004s0011 10.0kb upstream 10.0kb upstream 10954 true Scaffold4: 37367-48320 Capsella grandiflora
Cagra.0004s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold4: 38321-48320 Capsella grandiflora
Cagra.0004s0011 10.0kb downstream 10.0kb downstream 10954 true Scaffold4: 27367-38320 Capsella grandiflora
Cagra.0004s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold4: 27367-37366 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381584 5261 Brassicaceae View MSA
123803325 5264 Brassicales-Malvales View MSA
124300441 5266 SBM View MSA
124151628 5268 Malvidae View MSA
124074667 5270 Rosid View MSA
123753263 5271 Pentapetalae View MSA
122797953 5272 Eudicot View MSA
122051694 5273 Angiosperm View MSA
121351156 5274 Embryophyte View MSA
123382030 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain