Gene : Cagra.0448s0009 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31636:SF46 - SCARECROW-LIKE PROTEIN 11-RELATED Genomic Order:  9
Name:  ? Cagra.0448s0009 Secondary Identifier:  ? PAC:28906335
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0448s0009 0.5kb upstream 0.5kb upstream 2283 true Scaffold448: 32884-35166 Capsella grandiflora
Cagra.0448s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold448: 32884-33383 Capsella grandiflora
Cagra.0448s0009 0.5kb downstream 0.5kb downstream 2283 true Scaffold448: 33384-35666 Capsella grandiflora
Cagra.0448s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold448: 35167-35666 Capsella grandiflora
Cagra.0448s0009 1.0kb upstream 1.0kb upstream 2783 true Scaffold448: 32384-35166 Capsella grandiflora
Cagra.0448s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold448: 32384-33383 Capsella grandiflora
Cagra.0448s0009 1.0kb downstream 1.0kb downstream 2783 true Scaffold448: 33384-36166 Capsella grandiflora
Cagra.0448s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold448: 35167-36166 Capsella grandiflora
Cagra.0448s0009 2.0kb upstream 2.0kb upstream 3783 true Scaffold448: 31384-35166 Capsella grandiflora
Cagra.0448s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold448: 31384-33383 Capsella grandiflora
Cagra.0448s0009 2.0kb downstream 2.0kb downstream 3783 true Scaffold448: 33384-37166 Capsella grandiflora
Cagra.0448s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold448: 35167-37166 Capsella grandiflora
Cagra.0448s0009 5.0kb upstream 5.0kb upstream 6783 true Scaffold448: 28384-35166 Capsella grandiflora
Cagra.0448s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold448: 28384-33383 Capsella grandiflora
Cagra.0448s0009 5.0kb downstream 5.0kb downstream 6783 true Scaffold448: 33384-40166 Capsella grandiflora
Cagra.0448s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold448: 35167-40166 Capsella grandiflora
Cagra.0448s0009 10.0kb upstream 10.0kb upstream 11783 true Scaffold448: 23384-35166 Capsella grandiflora
Cagra.0448s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold448: 23384-33383 Capsella grandiflora
Cagra.0448s0009 10.0kb downstream 10.0kb downstream 11783 true Scaffold448: 33384-45166 Capsella grandiflora
Cagra.0448s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold448: 35167-45166 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122030269 5273 Angiosperm View MSA
122371779 5261 Brassicaceae View MSA
123800231 5264 Brassicales-Malvales View MSA
124351413 5266 SBM View MSA
124248158 5268 Malvidae View MSA
124070691 5270 Rosid View MSA
123752747 5271 Pentapetalae View MSA
122774765 5272 Eudicot View MSA
121350999 5274 Embryophyte View MSA
123381964 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain