Gene : Cagra.0448s0005 C. grandiflora v1.1
Defline:  (1 of 1) PTHR32382:SF0 - FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 4 Genomic Order:  5
Name:  ? Cagra.0448s0005 Secondary Identifier:  ? PAC:28906319
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0448s0005 0.5kb upstream 0.5kb upstream 1775 true Scaffold448: 17415-19189 Capsella grandiflora
Cagra.0448s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold448: 18690-19189 Capsella grandiflora
Cagra.0448s0005 0.5kb downstream 0.5kb downstream 1775 true Scaffold448: 16915-18689 Capsella grandiflora
Cagra.0448s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold448: 16915-17414 Capsella grandiflora
Cagra.0448s0005 1.0kb upstream 1.0kb upstream 2275 true Scaffold448: 17415-19689 Capsella grandiflora
Cagra.0448s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold448: 18690-19689 Capsella grandiflora
Cagra.0448s0005 1.0kb downstream 1.0kb downstream 2275 true Scaffold448: 16415-18689 Capsella grandiflora
Cagra.0448s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold448: 16415-17414 Capsella grandiflora
Cagra.0448s0005 2.0kb upstream 2.0kb upstream 3275 true Scaffold448: 17415-20689 Capsella grandiflora
Cagra.0448s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold448: 18690-20689 Capsella grandiflora
Cagra.0448s0005 2.0kb downstream 2.0kb downstream 3275 true Scaffold448: 15415-18689 Capsella grandiflora
Cagra.0448s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold448: 15415-17414 Capsella grandiflora
Cagra.0448s0005 5.0kb upstream 5.0kb upstream 6275 true Scaffold448: 17415-23689 Capsella grandiflora
Cagra.0448s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold448: 18690-23689 Capsella grandiflora
Cagra.0448s0005 5.0kb downstream 5.0kb downstream 6275 true Scaffold448: 12415-18689 Capsella grandiflora
Cagra.0448s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold448: 12415-17414 Capsella grandiflora
Cagra.0448s0005 10.0kb upstream 10.0kb upstream 11275 true Scaffold448: 17415-28689 Capsella grandiflora
Cagra.0448s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold448: 18690-28689 Capsella grandiflora
Cagra.0448s0005 10.0kb downstream 10.0kb downstream 11275 true Scaffold448: 7415-18689 Capsella grandiflora
Cagra.0448s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold448: 7415-17414 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370377 5261 Brassicaceae View MSA
123830234 5264 Brassicales-Malvales View MSA
124341497 5266 SBM View MSA
124241100 5268 Malvidae View MSA
124061548 5270 Rosid View MSA
123744352 5271 Pentapetalae View MSA
122795862 5272 Eudicot View MSA
122048693 5273 Angiosperm View MSA
121351509 5274 Embryophyte View MSA
123426561 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain