Gene : Cagra.0448s0052 C. grandiflora v1.1
Defline:  (1 of 137) PTHR31790:SF10 - F-BOX ASSOCIATED UBIQUITINATION EFFECTOR FAMILY PROTEIN-RELATED Genomic Order:  52
Name:  ? Cagra.0448s0052 Secondary Identifier:  ? PAC:28906296
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0448s0052 0.5kb upstream 0.5kb upstream 1697 true Scaffold448: 189976-191672 Capsella grandiflora
Cagra.0448s0052 0.5kb upstream 0.5kb upstream 500 false Scaffold448: 189976-190475 Capsella grandiflora
Cagra.0448s0052 0.5kb downstream 0.5kb downstream 1697 true Scaffold448: 190476-192172 Capsella grandiflora
Cagra.0448s0052 0.5kb downstream 0.5kb downstream 500 false Scaffold448: 191673-192172 Capsella grandiflora
Cagra.0448s0052 1.0kb upstream 1.0kb upstream 2197 true Scaffold448: 189476-191672 Capsella grandiflora
Cagra.0448s0052 1.0kb upstream 1.0kb upstream 1000 false Scaffold448: 189476-190475 Capsella grandiflora
Cagra.0448s0052 1.0kb downstream 1.0kb downstream 2197 true Scaffold448: 190476-192672 Capsella grandiflora
Cagra.0448s0052 1.0kb downstream 1.0kb downstream 1000 false Scaffold448: 191673-192672 Capsella grandiflora
Cagra.0448s0052 2.0kb upstream 2.0kb upstream 3197 true Scaffold448: 188476-191672 Capsella grandiflora
Cagra.0448s0052 2.0kb upstream 2.0kb upstream 2000 false Scaffold448: 188476-190475 Capsella grandiflora
Cagra.0448s0052 2.0kb downstream 2.0kb downstream 3197 true Scaffold448: 190476-193672 Capsella grandiflora
Cagra.0448s0052 2.0kb downstream 2.0kb downstream 2000 false Scaffold448: 191673-193672 Capsella grandiflora
Cagra.0448s0052 5.0kb upstream 5.0kb upstream 6197 true Scaffold448: 185476-191672 Capsella grandiflora
Cagra.0448s0052 5.0kb upstream 5.0kb upstream 5000 false Scaffold448: 185476-190475 Capsella grandiflora
Cagra.0448s0052 5.0kb downstream 5.0kb downstream 6197 true Scaffold448: 190476-196672 Capsella grandiflora
Cagra.0448s0052 5.0kb downstream 5.0kb downstream 5000 false Scaffold448: 191673-196672 Capsella grandiflora
Cagra.0448s0052 10.0kb upstream 10.0kb upstream 11197 true Scaffold448: 180476-191672 Capsella grandiflora
Cagra.0448s0052 10.0kb upstream 10.0kb upstream 10000 false Scaffold448: 180476-190475 Capsella grandiflora
Cagra.0448s0052 10.0kb downstream 10.0kb downstream 11197 true Scaffold448: 190476-201672 Capsella grandiflora
Cagra.0448s0052 10.0kb downstream 10.0kb downstream 10000 false Scaffold448: 191673-201672 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372025 5261 Brassicaceae View MSA
123800281 5264 Brassicales-Malvales View MSA
124297714 5266 SBM View MSA
124252683 5268 Malvidae View MSA
124074667 5270 Rosid View MSA
123753263 5271 Pentapetalae View MSA
122797953 5272 Eudicot View MSA
122051694 5273 Angiosperm View MSA
121351156 5274 Embryophyte View MSA
123382030 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain