Gene : Cagra.2968s0008 C. grandiflora v1.1
Defline:  (1 of 10) PF05910 - Plant protein of unknown function (DUF868) (DUF868) Genomic Order:  8
Name:  ? Cagra.2968s0008 Secondary Identifier:  ? PAC:28900322
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2968s0008 0.5kb upstream 0.5kb upstream 1496 true Scaffold2968: 31188-32683 Capsella grandiflora
Cagra.2968s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold2968: 31188-31687 Capsella grandiflora
Cagra.2968s0008 0.5kb downstream 0.5kb downstream 1496 true Scaffold2968: 31688-33183 Capsella grandiflora
Cagra.2968s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold2968: 32684-33183 Capsella grandiflora
Cagra.2968s0008 1.0kb upstream 1.0kb upstream 1996 true Scaffold2968: 30688-32683 Capsella grandiflora
Cagra.2968s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold2968: 30688-31687 Capsella grandiflora
Cagra.2968s0008 1.0kb downstream 1.0kb downstream 1996 true Scaffold2968: 31688-33683 Capsella grandiflora
Cagra.2968s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold2968: 32684-33683 Capsella grandiflora
Cagra.2968s0008 2.0kb upstream 2.0kb upstream 2996 true Scaffold2968: 29688-32683 Capsella grandiflora
Cagra.2968s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold2968: 29688-31687 Capsella grandiflora
Cagra.2968s0008 2.0kb downstream 2.0kb downstream 2996 true Scaffold2968: 31688-34683 Capsella grandiflora
Cagra.2968s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold2968: 32684-34683 Capsella grandiflora
Cagra.2968s0008 5.0kb upstream 5.0kb upstream 5996 true Scaffold2968: 26688-32683 Capsella grandiflora
Cagra.2968s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold2968: 26688-31687 Capsella grandiflora
Cagra.2968s0008 5.0kb downstream 5.0kb downstream 5996 true Scaffold2968: 31688-37683 Capsella grandiflora
Cagra.2968s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold2968: 32684-37683 Capsella grandiflora
Cagra.2968s0008 10.0kb upstream 10.0kb upstream 10996 true Scaffold2968: 21688-32683 Capsella grandiflora
Cagra.2968s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold2968: 21688-31687 Capsella grandiflora
Cagra.2968s0008 10.0kb downstream 10.0kb downstream 10996 true Scaffold2968: 31688-42683 Capsella grandiflora
Cagra.2968s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold2968: 32684-42683 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373704 5261 Brassicaceae View MSA
123831368 5264 Brassicales-Malvales View MSA
124338069 5266 SBM View MSA
124239203 5268 Malvidae View MSA
124061671 5270 Rosid View MSA
123746033 5271 Pentapetalae View MSA
122790628 5272 Eudicot View MSA
122050647 5273 Angiosperm View MSA
121312046 5274 Embryophyte View MSA
123349257 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain