Gene : Cagra.3258s0003 C. grandiflora v1.1
Defline:  (1 of 7) PTHR13871:SF42 - CYSTEINE/HISTIDINE-RICH C1 DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  3
Name:  ? Cagra.3258s0003 Secondary Identifier:  ? PAC:28898059
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3258s0003 0.5kb upstream 0.5kb upstream 1274 true Scaffold3258: 11546-12819 Capsella grandiflora
Cagra.3258s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold3258: 12320-12819 Capsella grandiflora
Cagra.3258s0003 0.5kb downstream 0.5kb downstream 1274 true Scaffold3258: 11046-12319 Capsella grandiflora
Cagra.3258s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold3258: 11046-11545 Capsella grandiflora
Cagra.3258s0003 1.0kb upstream 1.0kb upstream 1774 true Scaffold3258: 11546-13319 Capsella grandiflora
Cagra.3258s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold3258: 12320-13319 Capsella grandiflora
Cagra.3258s0003 1.0kb downstream 1.0kb downstream 1774 true Scaffold3258: 10546-12319 Capsella grandiflora
Cagra.3258s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold3258: 10546-11545 Capsella grandiflora
Cagra.3258s0003 2.0kb upstream 2.0kb upstream 2774 true Scaffold3258: 11546-14319 Capsella grandiflora
Cagra.3258s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold3258: 12320-14319 Capsella grandiflora
Cagra.3258s0003 2.0kb downstream 2.0kb downstream 2774 true Scaffold3258: 9546-12319 Capsella grandiflora
Cagra.3258s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold3258: 9546-11545 Capsella grandiflora
Cagra.3258s0003 5.0kb upstream 5.0kb upstream 5774 true Scaffold3258: 11546-17319 Capsella grandiflora
Cagra.3258s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold3258: 12320-17319 Capsella grandiflora
Cagra.3258s0003 5.0kb downstream 5.0kb downstream 5774 true Scaffold3258: 6546-12319 Capsella grandiflora
Cagra.3258s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold3258: 6546-11545 Capsella grandiflora
Cagra.3258s0003 10.0kb upstream 10.0kb upstream 9913 true Scaffold3258: 11546-21458 Capsella grandiflora
Cagra.3258s0003 10.0kb upstream 10.0kb upstream 9139 false Scaffold3258: 12320-21458 Capsella grandiflora
Cagra.3258s0003 10.0kb downstream 10.0kb downstream 10774 true Scaffold3258: 1546-12319 Capsella grandiflora
Cagra.3258s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold3258: 1546-11545 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378925 5261 Brassicaceae View MSA
123802037 5264 Brassicales-Malvales View MSA
124299262 5266 SBM View MSA
124254398 5268 Malvidae View MSA
124074653 5270 Rosid View MSA
123751823 5271 Pentapetalae View MSA
122797568 5272 Eudicot View MSA
122051127 5273 Angiosperm View MSA
121351229 5274 Embryophyte View MSA
123382066 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain