Gene : Cagra.3264s0007 C. grandiflora v1.1
Defline:  (1 of 4) PTHR31636:SF54 - SCARECROW-LIKE PROTEIN 14-RELATED Genomic Order:  7
Name:  ? Cagra.3264s0007 Secondary Identifier:  ? PAC:28912431
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3264s0007 0.5kb upstream 0.5kb upstream 2399 true Scaffold3264: 18006-20404 Capsella grandiflora
Cagra.3264s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold3264: 18006-18505 Capsella grandiflora
Cagra.3264s0007 0.5kb downstream 0.5kb downstream 2399 true Scaffold3264: 18506-20904 Capsella grandiflora
Cagra.3264s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold3264: 20405-20904 Capsella grandiflora
Cagra.3264s0007 1.0kb upstream 1.0kb upstream 2899 true Scaffold3264: 17506-20404 Capsella grandiflora
Cagra.3264s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold3264: 17506-18505 Capsella grandiflora
Cagra.3264s0007 1.0kb downstream 1.0kb downstream 2899 true Scaffold3264: 18506-21404 Capsella grandiflora
Cagra.3264s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold3264: 20405-21404 Capsella grandiflora
Cagra.3264s0007 2.0kb upstream 2.0kb upstream 3899 true Scaffold3264: 16506-20404 Capsella grandiflora
Cagra.3264s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold3264: 16506-18505 Capsella grandiflora
Cagra.3264s0007 2.0kb downstream 2.0kb downstream 3899 true Scaffold3264: 18506-22404 Capsella grandiflora
Cagra.3264s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold3264: 20405-22404 Capsella grandiflora
Cagra.3264s0007 5.0kb upstream 5.0kb upstream 6899 true Scaffold3264: 13506-20404 Capsella grandiflora
Cagra.3264s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold3264: 13506-18505 Capsella grandiflora
Cagra.3264s0007 5.0kb downstream 5.0kb downstream 6899 true Scaffold3264: 18506-25404 Capsella grandiflora
Cagra.3264s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold3264: 20405-25404 Capsella grandiflora
Cagra.3264s0007 10.0kb upstream 10.0kb upstream 11899 true Scaffold3264: 8506-20404 Capsella grandiflora
Cagra.3264s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold3264: 8506-18505 Capsella grandiflora
Cagra.3264s0007 10.0kb downstream 10.0kb downstream 11899 true Scaffold3264: 18506-30404 Capsella grandiflora
Cagra.3264s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold3264: 20405-30404 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370079 5261 Brassicaceae View MSA
123799895 5264 Brassicales-Malvales View MSA
124297368 5266 SBM View MSA
124149279 5268 Malvidae View MSA
123875117 5270 Rosid View MSA
123458994 5271 Pentapetalae View MSA
122494390 5272 Eudicot View MSA
122048011 5273 Angiosperm View MSA
121350999 5274 Embryophyte View MSA
123381964 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain