Gene : Cagra.3264s0006 C. grandiflora v1.1
Defline:  (1 of 4) PTHR31636:SF54 - SCARECROW-LIKE PROTEIN 14-RELATED Genomic Order:  6
Name:  ? Cagra.3264s0006 Secondary Identifier:  ? PAC:28912435
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3264s0006 0.5kb upstream 0.5kb upstream 2648 true Scaffold3264: 14755-17402 Capsella grandiflora
Cagra.3264s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold3264: 14755-15254 Capsella grandiflora
Cagra.3264s0006 0.5kb downstream 0.5kb downstream 2648 true Scaffold3264: 15255-17902 Capsella grandiflora
Cagra.3264s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold3264: 17403-17902 Capsella grandiflora
Cagra.3264s0006 1.0kb upstream 1.0kb upstream 3148 true Scaffold3264: 14255-17402 Capsella grandiflora
Cagra.3264s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold3264: 14255-15254 Capsella grandiflora
Cagra.3264s0006 1.0kb downstream 1.0kb downstream 3148 true Scaffold3264: 15255-18402 Capsella grandiflora
Cagra.3264s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold3264: 17403-18402 Capsella grandiflora
Cagra.3264s0006 2.0kb upstream 2.0kb upstream 4148 true Scaffold3264: 13255-17402 Capsella grandiflora
Cagra.3264s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold3264: 13255-15254 Capsella grandiflora
Cagra.3264s0006 2.0kb downstream 2.0kb downstream 4148 true Scaffold3264: 15255-19402 Capsella grandiflora
Cagra.3264s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold3264: 17403-19402 Capsella grandiflora
Cagra.3264s0006 5.0kb upstream 5.0kb upstream 7148 true Scaffold3264: 10255-17402 Capsella grandiflora
Cagra.3264s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold3264: 10255-15254 Capsella grandiflora
Cagra.3264s0006 5.0kb downstream 5.0kb downstream 7148 true Scaffold3264: 15255-22402 Capsella grandiflora
Cagra.3264s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold3264: 17403-22402 Capsella grandiflora
Cagra.3264s0006 10.0kb upstream 10.0kb upstream 12148 true Scaffold3264: 5255-17402 Capsella grandiflora
Cagra.3264s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold3264: 5255-15254 Capsella grandiflora
Cagra.3264s0006 10.0kb downstream 10.0kb downstream 12148 true Scaffold3264: 15255-27402 Capsella grandiflora
Cagra.3264s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold3264: 17403-27402 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368780 5261 Brassicaceae View MSA
123799655 5264 Brassicales-Malvales View MSA
124297153 5266 SBM View MSA
124149113 5268 Malvidae View MSA
123874984 5270 Rosid View MSA
123750613 5271 Pentapetalae View MSA
122790030 5272 Eudicot View MSA
122048011 5273 Angiosperm View MSA
121350999 5274 Embryophyte View MSA
123381964 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain