Gene : Cagra.0077s0020 C. grandiflora v1.1
Defline:  (1 of 17) PTHR32133:SF82 - F-BOX ASSOCIATED UBIQUITINATION EFFECTOR FAMILY PROTEIN-RELATED Genomic Order:  20
Name:  ? Cagra.0077s0020 Secondary Identifier:  ? PAC:28915924
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0077s0020 0.5kb upstream 0.5kb upstream 1607 true Scaffold77: 122710-124316 Capsella grandiflora
Cagra.0077s0020 0.5kb upstream 0.5kb upstream 500 false Scaffold77: 123817-124316 Capsella grandiflora
Cagra.0077s0020 0.5kb downstream 0.5kb downstream 1607 true Scaffold77: 122210-123816 Capsella grandiflora
Cagra.0077s0020 0.5kb downstream 0.5kb downstream 500 false Scaffold77: 122210-122709 Capsella grandiflora
Cagra.0077s0020 1.0kb upstream 1.0kb upstream 2107 true Scaffold77: 122710-124816 Capsella grandiflora
Cagra.0077s0020 1.0kb upstream 1.0kb upstream 1000 false Scaffold77: 123817-124816 Capsella grandiflora
Cagra.0077s0020 1.0kb downstream 1.0kb downstream 2107 true Scaffold77: 121710-123816 Capsella grandiflora
Cagra.0077s0020 1.0kb downstream 1.0kb downstream 1000 false Scaffold77: 121710-122709 Capsella grandiflora
Cagra.0077s0020 2.0kb upstream 2.0kb upstream 3107 true Scaffold77: 122710-125816 Capsella grandiflora
Cagra.0077s0020 2.0kb upstream 2.0kb upstream 2000 false Scaffold77: 123817-125816 Capsella grandiflora
Cagra.0077s0020 2.0kb downstream 2.0kb downstream 3107 true Scaffold77: 120710-123816 Capsella grandiflora
Cagra.0077s0020 2.0kb downstream 2.0kb downstream 2000 false Scaffold77: 120710-122709 Capsella grandiflora
Cagra.0077s0020 5.0kb upstream 5.0kb upstream 6107 true Scaffold77: 122710-128816 Capsella grandiflora
Cagra.0077s0020 5.0kb upstream 5.0kb upstream 5000 false Scaffold77: 123817-128816 Capsella grandiflora
Cagra.0077s0020 5.0kb downstream 5.0kb downstream 6107 true Scaffold77: 117710-123816 Capsella grandiflora
Cagra.0077s0020 5.0kb downstream 5.0kb downstream 5000 false Scaffold77: 117710-122709 Capsella grandiflora
Cagra.0077s0020 10.0kb upstream 10.0kb upstream 11031 true Scaffold77: 122710-133740 Capsella grandiflora
Cagra.0077s0020 10.0kb upstream 10.0kb upstream 9924 false Scaffold77: 123817-133740 Capsella grandiflora
Cagra.0077s0020 10.0kb downstream 10.0kb downstream 11107 true Scaffold77: 112710-123816 Capsella grandiflora
Cagra.0077s0020 10.0kb downstream 10.0kb downstream 10000 false Scaffold77: 112710-122709 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381507 5261 Brassicaceae View MSA
123803280 5264 Brassicales-Malvales View MSA
124349957 5266 SBM View MSA
124254638 5268 Malvidae View MSA
124074667 5270 Rosid View MSA
123753263 5271 Pentapetalae View MSA
122797953 5272 Eudicot View MSA
122051694 5273 Angiosperm View MSA
121351156 5274 Embryophyte View MSA
123382030 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain