Gene : Cagra.0327s0002 C. grandiflora v1.1
Defline:  (1 of 10) PF05910 - Plant protein of unknown function (DUF868) (DUF868) Genomic Order:  2
Name:  ? Cagra.0327s0002 Secondary Identifier:  ? PAC:28908249
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0327s0002 0.5kb upstream 0.5kb upstream 1768 true Scaffold327: 2447-4214 Capsella grandiflora
Cagra.0327s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold327: 3715-4214 Capsella grandiflora
Cagra.0327s0002 0.5kb downstream 0.5kb downstream 1768 true Scaffold327: 1947-3714 Capsella grandiflora
Cagra.0327s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold327: 1947-2446 Capsella grandiflora
Cagra.0327s0002 1.0kb upstream 1.0kb upstream 2268 true Scaffold327: 2447-4714 Capsella grandiflora
Cagra.0327s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold327: 3715-4714 Capsella grandiflora
Cagra.0327s0002 1.0kb downstream 1.0kb downstream 2268 true Scaffold327: 1447-3714 Capsella grandiflora
Cagra.0327s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold327: 1447-2446 Capsella grandiflora
Cagra.0327s0002 2.0kb upstream 2.0kb upstream 3268 true Scaffold327: 2447-5714 Capsella grandiflora
Cagra.0327s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold327: 3715-5714 Capsella grandiflora
Cagra.0327s0002 2.0kb downstream 2.0kb downstream 3268 true Scaffold327: 447-3714 Capsella grandiflora
Cagra.0327s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold327: 447-2446 Capsella grandiflora
Cagra.0327s0002 5.0kb upstream 5.0kb upstream 6268 true Scaffold327: 2447-8714 Capsella grandiflora
Cagra.0327s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold327: 3715-8714 Capsella grandiflora
Cagra.0327s0002 5.0kb downstream 5.0kb downstream 3714 true Scaffold327: 1-3714 Capsella grandiflora
Cagra.0327s0002 5.0kb downstream 5.0kb downstream 2446 false Scaffold327: 1-2446 Capsella grandiflora
Cagra.0327s0002 10.0kb upstream 10.0kb upstream 11268 true Scaffold327: 2447-13714 Capsella grandiflora
Cagra.0327s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold327: 3715-13714 Capsella grandiflora
Cagra.0327s0002 10.0kb downstream 10.0kb downstream 3714 true Scaffold327: 1-3714 Capsella grandiflora
Cagra.0327s0002 10.0kb downstream 10.0kb downstream 2446 false Scaffold327: 1-2446 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343343 5261 Brassicaceae View MSA
123783576 5264 Brassicales-Malvales View MSA
124281800 5266 SBM View MSA
124247851 5268 Malvidae View MSA
124067347 5270 Rosid View MSA
123746466 5271 Pentapetalae View MSA
122797152 5272 Eudicot View MSA
122048974 5273 Angiosperm View MSA
121311194 5274 Embryophyte View MSA
123348523 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain