Gene : Cagra.0328s0001 C. grandiflora v1.1
Defline:  (1 of 6) PTHR31896:SF12 - ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN-RELATED Genomic Order:  1
Name:  ? Cagra.0328s0001 Secondary Identifier:  ? PAC:28905457
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-361 Capsella grandiflora pathologic  
Cgrandiflora PWY-6039 Capsella grandiflora pathologic  
Cgrandiflora PWY-6040 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0328s0001 0.5kb upstream 0.5kb upstream 1829 true Scaffold328: 466-2294 Capsella grandiflora
Cagra.0328s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold328: 1795-2294 Capsella grandiflora
Cagra.0328s0001 0.5kb downstream 0.5kb downstream 1794 true Scaffold328: 1-1794 Capsella grandiflora
Cagra.0328s0001 0.5kb downstream 0.5kb downstream 465 false Scaffold328: 1-465 Capsella grandiflora
Cagra.0328s0001 1.0kb upstream 1.0kb upstream 2329 true Scaffold328: 466-2794 Capsella grandiflora
Cagra.0328s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold328: 1795-2794 Capsella grandiflora
Cagra.0328s0001 1.0kb downstream 1.0kb downstream 1794 true Scaffold328: 1-1794 Capsella grandiflora
Cagra.0328s0001 1.0kb downstream 1.0kb downstream 465 false Scaffold328: 1-465 Capsella grandiflora
Cagra.0328s0001 2.0kb upstream 2.0kb upstream 2699 true Scaffold328: 466-3164 Capsella grandiflora
Cagra.0328s0001 2.0kb upstream 2.0kb upstream 1370 false Scaffold328: 1795-3164 Capsella grandiflora
Cagra.0328s0001 2.0kb downstream 2.0kb downstream 1794 true Scaffold328: 1-1794 Capsella grandiflora
Cagra.0328s0001 2.0kb downstream 2.0kb downstream 465 false Scaffold328: 1-465 Capsella grandiflora
Cagra.0328s0001 5.0kb upstream 5.0kb upstream 2699 true Scaffold328: 466-3164 Capsella grandiflora
Cagra.0328s0001 5.0kb upstream 5.0kb upstream 1370 false Scaffold328: 1795-3164 Capsella grandiflora
Cagra.0328s0001 5.0kb downstream 5.0kb downstream 1794 true Scaffold328: 1-1794 Capsella grandiflora
Cagra.0328s0001 5.0kb downstream 5.0kb downstream 465 false Scaffold328: 1-465 Capsella grandiflora
Cagra.0328s0001 10.0kb upstream 10.0kb upstream 2699 true Scaffold328: 466-3164 Capsella grandiflora
Cagra.0328s0001 10.0kb upstream 10.0kb upstream 1370 false Scaffold328: 1795-3164 Capsella grandiflora
Cagra.0328s0001 10.0kb downstream 10.0kb downstream 1794 true Scaffold328: 1-1794 Capsella grandiflora
Cagra.0328s0001 10.0kb downstream 10.0kb downstream 465 false Scaffold328: 1-465 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376453 5261 Brassicaceae View MSA
123801257 5264 Brassicales-Malvales View MSA
124298580 5266 SBM View MSA
124250776 5268 Malvidae View MSA
124061050 5270 Rosid View MSA
123747860 5271 Pentapetalae View MSA
122791254 5272 Eudicot View MSA
122051643 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain