Gene : Cagra.0062s0022 C. grandiflora v1.1
Defline:  (1 of 3) 1.1.1.44 - Phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) / Phosphogluconic acid dehydrogenase Genomic Order:  22
Name:  ? Cagra.0062s0022 Secondary Identifier:  ? PAC:28893949
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora OXIDATIVEPENT-PWY Capsella grandiflora pathologic  
Cgrandiflora PENTOSE-P-PWY Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0062s0022 0.5kb upstream 0.5kb upstream 1964 true Scaffold62: 64136-66099 Capsella grandiflora
Cagra.0062s0022 0.5kb upstream 0.5kb upstream 500 false Scaffold62: 64136-64635 Capsella grandiflora
Cagra.0062s0022 0.5kb downstream 0.5kb downstream 1964 true Scaffold62: 64636-66599 Capsella grandiflora
Cagra.0062s0022 0.5kb downstream 0.5kb downstream 500 false Scaffold62: 66100-66599 Capsella grandiflora
Cagra.0062s0022 1.0kb upstream 1.0kb upstream 2464 true Scaffold62: 63636-66099 Capsella grandiflora
Cagra.0062s0022 1.0kb upstream 1.0kb upstream 1000 false Scaffold62: 63636-64635 Capsella grandiflora
Cagra.0062s0022 1.0kb downstream 1.0kb downstream 2464 true Scaffold62: 64636-67099 Capsella grandiflora
Cagra.0062s0022 1.0kb downstream 1.0kb downstream 1000 false Scaffold62: 66100-67099 Capsella grandiflora
Cagra.0062s0022 2.0kb upstream 2.0kb upstream 3464 true Scaffold62: 62636-66099 Capsella grandiflora
Cagra.0062s0022 2.0kb upstream 2.0kb upstream 2000 false Scaffold62: 62636-64635 Capsella grandiflora
Cagra.0062s0022 2.0kb downstream 2.0kb downstream 3464 true Scaffold62: 64636-68099 Capsella grandiflora
Cagra.0062s0022 2.0kb downstream 2.0kb downstream 2000 false Scaffold62: 66100-68099 Capsella grandiflora
Cagra.0062s0022 5.0kb upstream 5.0kb upstream 6464 true Scaffold62: 59636-66099 Capsella grandiflora
Cagra.0062s0022 5.0kb upstream 5.0kb upstream 5000 false Scaffold62: 59636-64635 Capsella grandiflora
Cagra.0062s0022 5.0kb downstream 5.0kb downstream 6464 true Scaffold62: 64636-71099 Capsella grandiflora
Cagra.0062s0022 5.0kb downstream 5.0kb downstream 5000 false Scaffold62: 66100-71099 Capsella grandiflora
Cagra.0062s0022 10.0kb upstream 10.0kb upstream 11464 true Scaffold62: 54636-66099 Capsella grandiflora
Cagra.0062s0022 10.0kb upstream 10.0kb upstream 10000 false Scaffold62: 54636-64635 Capsella grandiflora
Cagra.0062s0022 10.0kb downstream 10.0kb downstream 11464 true Scaffold62: 64636-76099 Capsella grandiflora
Cagra.0062s0022 10.0kb downstream 10.0kb downstream 10000 false Scaffold62: 66100-76099 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376033 5261 Brassicaceae View MSA
123827873 5264 Brassicales-Malvales View MSA
124345460 5266 SBM View MSA
124242189 5268 Malvidae View MSA
124062586 5270 Rosid View MSA
123741270 5271 Pentapetalae View MSA
122792444 5272 Eudicot View MSA
122047871 5273 Angiosperm View MSA
121351017 5274 Embryophyte View MSA
123424238 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain