Gene : Cagra.0050s0013 C. grandiflora v1.1
Defline:  (1 of 4) PTHR31140:SF4 - B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR NGA1-RELATED Genomic Order:  13
Name:  ? Cagra.0050s0013 Secondary Identifier:  ? PAC:28916992
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0050s0013 0.5kb upstream 0.5kb upstream 1463 true Scaffold50: 46201-47663 Capsella grandiflora
Cagra.0050s0013 0.5kb upstream 0.5kb upstream 500 false Scaffold50: 47164-47663 Capsella grandiflora
Cagra.0050s0013 0.5kb downstream 0.5kb downstream 1463 true Scaffold50: 45701-47163 Capsella grandiflora
Cagra.0050s0013 0.5kb downstream 0.5kb downstream 500 false Scaffold50: 45701-46200 Capsella grandiflora
Cagra.0050s0013 1.0kb upstream 1.0kb upstream 1963 true Scaffold50: 46201-48163 Capsella grandiflora
Cagra.0050s0013 1.0kb upstream 1.0kb upstream 1000 false Scaffold50: 47164-48163 Capsella grandiflora
Cagra.0050s0013 1.0kb downstream 1.0kb downstream 1963 true Scaffold50: 45201-47163 Capsella grandiflora
Cagra.0050s0013 1.0kb downstream 1.0kb downstream 1000 false Scaffold50: 45201-46200 Capsella grandiflora
Cagra.0050s0013 2.0kb upstream 2.0kb upstream 2963 true Scaffold50: 46201-49163 Capsella grandiflora
Cagra.0050s0013 2.0kb upstream 2.0kb upstream 2000 false Scaffold50: 47164-49163 Capsella grandiflora
Cagra.0050s0013 2.0kb downstream 2.0kb downstream 2963 true Scaffold50: 44201-47163 Capsella grandiflora
Cagra.0050s0013 2.0kb downstream 2.0kb downstream 2000 false Scaffold50: 44201-46200 Capsella grandiflora
Cagra.0050s0013 5.0kb upstream 5.0kb upstream 5963 true Scaffold50: 46201-52163 Capsella grandiflora
Cagra.0050s0013 5.0kb upstream 5.0kb upstream 5000 false Scaffold50: 47164-52163 Capsella grandiflora
Cagra.0050s0013 5.0kb downstream 5.0kb downstream 5963 true Scaffold50: 41201-47163 Capsella grandiflora
Cagra.0050s0013 5.0kb downstream 5.0kb downstream 5000 false Scaffold50: 41201-46200 Capsella grandiflora
Cagra.0050s0013 10.0kb upstream 10.0kb upstream 10963 true Scaffold50: 46201-57163 Capsella grandiflora
Cagra.0050s0013 10.0kb upstream 10.0kb upstream 10000 false Scaffold50: 47164-57163 Capsella grandiflora
Cagra.0050s0013 10.0kb downstream 10.0kb downstream 10963 true Scaffold50: 36201-47163 Capsella grandiflora
Cagra.0050s0013 10.0kb downstream 10.0kb downstream 10000 false Scaffold50: 36201-46200 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373082 5261 Brassicaceae View MSA
123837410 5264 Brassicales-Malvales View MSA
124350382 5266 SBM View MSA
124246333 5268 Malvidae View MSA
124069436 5270 Rosid View MSA
123743929 5271 Pentapetalae View MSA
122797539 5272 Eudicot View MSA
122049835 5273 Angiosperm View MSA
121349423 5274 Embryophyte View MSA
123428387 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain