Gene : Cagra.3166s0007 C. grandiflora v1.1
Defline:  (1 of 4) PTHR10042 - EARLY GROWTH RESPONSE PROTEIN-RELATED Genomic Order:  7
Name:  ? Cagra.3166s0007 Secondary Identifier:  ? PAC:28899736
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3166s0007 0.5kb upstream 0.5kb upstream 986 true Scaffold3166: 26647-27632 Capsella grandiflora
Cagra.3166s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold3166: 26647-27146 Capsella grandiflora
Cagra.3166s0007 0.5kb downstream 0.5kb downstream 986 true Scaffold3166: 27147-28132 Capsella grandiflora
Cagra.3166s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold3166: 27633-28132 Capsella grandiflora
Cagra.3166s0007 1.0kb upstream 1.0kb upstream 1486 true Scaffold3166: 26147-27632 Capsella grandiflora
Cagra.3166s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold3166: 26147-27146 Capsella grandiflora
Cagra.3166s0007 1.0kb downstream 1.0kb downstream 1486 true Scaffold3166: 27147-28632 Capsella grandiflora
Cagra.3166s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold3166: 27633-28632 Capsella grandiflora
Cagra.3166s0007 2.0kb upstream 2.0kb upstream 2486 true Scaffold3166: 25147-27632 Capsella grandiflora
Cagra.3166s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold3166: 25147-27146 Capsella grandiflora
Cagra.3166s0007 2.0kb downstream 2.0kb downstream 2486 true Scaffold3166: 27147-29632 Capsella grandiflora
Cagra.3166s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold3166: 27633-29632 Capsella grandiflora
Cagra.3166s0007 5.0kb upstream 5.0kb upstream 5486 true Scaffold3166: 22147-27632 Capsella grandiflora
Cagra.3166s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold3166: 22147-27146 Capsella grandiflora
Cagra.3166s0007 5.0kb downstream 5.0kb downstream 5486 true Scaffold3166: 27147-32632 Capsella grandiflora
Cagra.3166s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold3166: 27633-32632 Capsella grandiflora
Cagra.3166s0007 10.0kb upstream 10.0kb upstream 10486 true Scaffold3166: 17147-27632 Capsella grandiflora
Cagra.3166s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold3166: 17147-27146 Capsella grandiflora
Cagra.3166s0007 10.0kb downstream 10.0kb downstream 10486 true Scaffold3166: 27147-37632 Capsella grandiflora
Cagra.3166s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold3166: 27633-37632 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370321 5261 Brassicaceae View MSA
123839596 5264 Brassicales-Malvales View MSA
124322625 5266 SBM View MSA
124245153 5268 Malvidae View MSA
124063867 5270 Rosid View MSA
123749739 5271 Pentapetalae View MSA
122794818 5272 Eudicot View MSA
122051006 5273 Angiosperm View MSA
121350581 5274 Embryophyte View MSA
123381808 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain