Gene : Cagra.3139s0001 C. grandiflora v1.1
Genomic Order:  1 Name:  ? Cagra.3139s0001
Secondary Identifier:  ? PAC:28904063
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3139s0001 0.5kb upstream 0.5kb upstream 848 true Scaffold3139: 327-1174 Capsella grandiflora
Cagra.3139s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold3139: 327-826 Capsella grandiflora
Cagra.3139s0001 0.5kb downstream 0.5kb downstream 576 true Scaffold3139: 827-1402 Capsella grandiflora
Cagra.3139s0001 0.5kb downstream 0.5kb downstream 228 false Scaffold3139: 1175-1402 Capsella grandiflora
Cagra.3139s0001 1.0kb upstream 1.0kb upstream 1174 true Scaffold3139: 1-1174 Capsella grandiflora
Cagra.3139s0001 1.0kb upstream 1.0kb upstream 826 false Scaffold3139: 1-826 Capsella grandiflora
Cagra.3139s0001 1.0kb downstream 1.0kb downstream 576 true Scaffold3139: 827-1402 Capsella grandiflora
Cagra.3139s0001 1.0kb downstream 1.0kb downstream 228 false Scaffold3139: 1175-1402 Capsella grandiflora
Cagra.3139s0001 2.0kb upstream 2.0kb upstream 1174 true Scaffold3139: 1-1174 Capsella grandiflora
Cagra.3139s0001 2.0kb upstream 2.0kb upstream 826 false Scaffold3139: 1-826 Capsella grandiflora
Cagra.3139s0001 2.0kb downstream 2.0kb downstream 576 true Scaffold3139: 827-1402 Capsella grandiflora
Cagra.3139s0001 2.0kb downstream 2.0kb downstream 228 false Scaffold3139: 1175-1402 Capsella grandiflora
Cagra.3139s0001 5.0kb upstream 5.0kb upstream 1174 true Scaffold3139: 1-1174 Capsella grandiflora
Cagra.3139s0001 5.0kb upstream 5.0kb upstream 826 false Scaffold3139: 1-826 Capsella grandiflora
Cagra.3139s0001 5.0kb downstream 5.0kb downstream 576 true Scaffold3139: 827-1402 Capsella grandiflora
Cagra.3139s0001 5.0kb downstream 5.0kb downstream 228 false Scaffold3139: 1175-1402 Capsella grandiflora
Cagra.3139s0001 10.0kb upstream 10.0kb upstream 1174 true Scaffold3139: 1-1174 Capsella grandiflora
Cagra.3139s0001 10.0kb upstream 10.0kb upstream 826 false Scaffold3139: 1-826 Capsella grandiflora
Cagra.3139s0001 10.0kb downstream 10.0kb downstream 576 true Scaffold3139: 827-1402 Capsella grandiflora
Cagra.3139s0001 10.0kb downstream 10.0kb downstream 228 false Scaffold3139: 1175-1402 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372361 5261 Brassicaceae View MSA
123829532 5264 Brassicales-Malvales View MSA
124344058 5266 SBM View MSA
124241871 5268 Malvidae View MSA
124061519 5270 Rosid View MSA
123741482 5271 Pentapetalae View MSA
122792533 5272 Eudicot View MSA
122041645 5273 Angiosperm View MSA
121343821 5274 Embryophyte View MSA
123426521 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain