Gene : Cagra.3392s0016 C. grandiflora v1.1
Defline:  (1 of 6) 2.5.1.112 - Adenylate dimethylallyltransferase (ADP/ATP-dependent) / Isopentenyltransferase Genomic Order:  16
Name:  ? Cagra.3392s0016 Secondary Identifier:  ? PAC:28897992
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-2681 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3392s0016 0.5kb upstream 0.5kb upstream 1520 true Scaffold3392: 64150-65669 Capsella grandiflora
Cagra.3392s0016 0.5kb upstream 0.5kb upstream 500 false Scaffold3392: 64150-64649 Capsella grandiflora
Cagra.3392s0016 0.5kb downstream 0.5kb downstream 1520 true Scaffold3392: 64650-66169 Capsella grandiflora
Cagra.3392s0016 0.5kb downstream 0.5kb downstream 500 false Scaffold3392: 65670-66169 Capsella grandiflora
Cagra.3392s0016 1.0kb upstream 1.0kb upstream 2020 true Scaffold3392: 63650-65669 Capsella grandiflora
Cagra.3392s0016 1.0kb upstream 1.0kb upstream 1000 false Scaffold3392: 63650-64649 Capsella grandiflora
Cagra.3392s0016 1.0kb downstream 1.0kb downstream 2020 true Scaffold3392: 64650-66669 Capsella grandiflora
Cagra.3392s0016 1.0kb downstream 1.0kb downstream 1000 false Scaffold3392: 65670-66669 Capsella grandiflora
Cagra.3392s0016 2.0kb upstream 2.0kb upstream 3020 true Scaffold3392: 62650-65669 Capsella grandiflora
Cagra.3392s0016 2.0kb upstream 2.0kb upstream 2000 false Scaffold3392: 62650-64649 Capsella grandiflora
Cagra.3392s0016 2.0kb downstream 2.0kb downstream 3020 true Scaffold3392: 64650-67669 Capsella grandiflora
Cagra.3392s0016 2.0kb downstream 2.0kb downstream 2000 false Scaffold3392: 65670-67669 Capsella grandiflora
Cagra.3392s0016 5.0kb upstream 5.0kb upstream 6020 true Scaffold3392: 59650-65669 Capsella grandiflora
Cagra.3392s0016 5.0kb upstream 5.0kb upstream 5000 false Scaffold3392: 59650-64649 Capsella grandiflora
Cagra.3392s0016 5.0kb downstream 5.0kb downstream 6020 true Scaffold3392: 64650-70669 Capsella grandiflora
Cagra.3392s0016 5.0kb downstream 5.0kb downstream 5000 false Scaffold3392: 65670-70669 Capsella grandiflora
Cagra.3392s0016 10.0kb upstream 10.0kb upstream 11020 true Scaffold3392: 54650-65669 Capsella grandiflora
Cagra.3392s0016 10.0kb upstream 10.0kb upstream 10000 false Scaffold3392: 54650-64649 Capsella grandiflora
Cagra.3392s0016 10.0kb downstream 10.0kb downstream 11020 true Scaffold3392: 64650-75669 Capsella grandiflora
Cagra.3392s0016 10.0kb downstream 10.0kb downstream 10000 false Scaffold3392: 65670-75669 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379425 5261 Brassicaceae View MSA
123837698 5264 Brassicales-Malvales View MSA
124349222 5266 SBM View MSA
124250835 5268 Malvidae View MSA
124061925 5270 Rosid View MSA
123742682 5271 Pentapetalae View MSA
122792550 5272 Eudicot View MSA
122046326 5273 Angiosperm View MSA
121310589 5274 Embryophyte View MSA
123428607 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain