Gene : Cagra.3366s0002 C. grandiflora v1.1
Defline:  (1 of 6) PTHR10168:SF115 - MONOTHIOL GLUTAREDOXIN-S2-RELATED Genomic Order:  2
Name:  ? Cagra.3366s0002 Secondary Identifier:  ? PAC:28915136
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora THIOREDOX-PWY Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3366s0002 0.5kb upstream 0.5kb upstream 809 true Scaffold3366: 4127-4935 Capsella grandiflora
Cagra.3366s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold3366: 4436-4935 Capsella grandiflora
Cagra.3366s0002 0.5kb downstream 0.5kb downstream 809 true Scaffold3366: 3627-4435 Capsella grandiflora
Cagra.3366s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold3366: 3627-4126 Capsella grandiflora
Cagra.3366s0002 1.0kb upstream 1.0kb upstream 1309 true Scaffold3366: 4127-5435 Capsella grandiflora
Cagra.3366s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold3366: 4436-5435 Capsella grandiflora
Cagra.3366s0002 1.0kb downstream 1.0kb downstream 1309 true Scaffold3366: 3127-4435 Capsella grandiflora
Cagra.3366s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold3366: 3127-4126 Capsella grandiflora
Cagra.3366s0002 2.0kb upstream 2.0kb upstream 2309 true Scaffold3366: 4127-6435 Capsella grandiflora
Cagra.3366s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold3366: 4436-6435 Capsella grandiflora
Cagra.3366s0002 2.0kb downstream 2.0kb downstream 2309 true Scaffold3366: 2127-4435 Capsella grandiflora
Cagra.3366s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold3366: 2127-4126 Capsella grandiflora
Cagra.3366s0002 5.0kb upstream 5.0kb upstream 5309 true Scaffold3366: 4127-9435 Capsella grandiflora
Cagra.3366s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold3366: 4436-9435 Capsella grandiflora
Cagra.3366s0002 5.0kb downstream 5.0kb downstream 4435 true Scaffold3366: 1-4435 Capsella grandiflora
Cagra.3366s0002 5.0kb downstream 5.0kb downstream 4126 false Scaffold3366: 1-4126 Capsella grandiflora
Cagra.3366s0002 10.0kb upstream 10.0kb upstream 10309 true Scaffold3366: 4127-14435 Capsella grandiflora
Cagra.3366s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold3366: 4436-14435 Capsella grandiflora
Cagra.3366s0002 10.0kb downstream 10.0kb downstream 4435 true Scaffold3366: 1-4435 Capsella grandiflora
Cagra.3366s0002 10.0kb downstream 10.0kb downstream 4126 false Scaffold3366: 1-4126 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380228 5261 Brassicaceae View MSA
123802610 5264 Brassicales-Malvales View MSA
124299792 5266 SBM View MSA
124151116 5268 Malvidae View MSA
124065787 5270 Rosid View MSA
123750086 5271 Pentapetalae View MSA
122796200 5272 Eudicot View MSA
122047042 5273 Angiosperm View MSA
121349593 5274 Embryophyte View MSA
123381368 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain