Gene : Cagra.3373s0054 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31100:SF2 - AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 18-RELATED Genomic Order:  54
Name:  ? Cagra.3373s0054 Secondary Identifier:  ? PAC:28894206
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3373s0054 0.5kb upstream 0.5kb upstream 1316 true Scaffold3373: 189252-190567 Capsella grandiflora
Cagra.3373s0054 0.5kb upstream 0.5kb upstream 500 false Scaffold3373: 190068-190567 Capsella grandiflora
Cagra.3373s0054 0.5kb downstream 0.5kb downstream 1316 true Scaffold3373: 188752-190067 Capsella grandiflora
Cagra.3373s0054 0.5kb downstream 0.5kb downstream 500 false Scaffold3373: 188752-189251 Capsella grandiflora
Cagra.3373s0054 1.0kb upstream 1.0kb upstream 1816 true Scaffold3373: 189252-191067 Capsella grandiflora
Cagra.3373s0054 1.0kb upstream 1.0kb upstream 1000 false Scaffold3373: 190068-191067 Capsella grandiflora
Cagra.3373s0054 1.0kb downstream 1.0kb downstream 1816 true Scaffold3373: 188252-190067 Capsella grandiflora
Cagra.3373s0054 1.0kb downstream 1.0kb downstream 1000 false Scaffold3373: 188252-189251 Capsella grandiflora
Cagra.3373s0054 2.0kb upstream 2.0kb upstream 2816 true Scaffold3373: 189252-192067 Capsella grandiflora
Cagra.3373s0054 2.0kb upstream 2.0kb upstream 2000 false Scaffold3373: 190068-192067 Capsella grandiflora
Cagra.3373s0054 2.0kb downstream 2.0kb downstream 2816 true Scaffold3373: 187252-190067 Capsella grandiflora
Cagra.3373s0054 2.0kb downstream 2.0kb downstream 2000 false Scaffold3373: 187252-189251 Capsella grandiflora
Cagra.3373s0054 5.0kb upstream 5.0kb upstream 5816 true Scaffold3373: 189252-195067 Capsella grandiflora
Cagra.3373s0054 5.0kb upstream 5.0kb upstream 5000 false Scaffold3373: 190068-195067 Capsella grandiflora
Cagra.3373s0054 5.0kb downstream 5.0kb downstream 5816 true Scaffold3373: 184252-190067 Capsella grandiflora
Cagra.3373s0054 5.0kb downstream 5.0kb downstream 5000 false Scaffold3373: 184252-189251 Capsella grandiflora
Cagra.3373s0054 10.0kb upstream 10.0kb upstream 10816 true Scaffold3373: 189252-200067 Capsella grandiflora
Cagra.3373s0054 10.0kb upstream 10.0kb upstream 10000 false Scaffold3373: 190068-200067 Capsella grandiflora
Cagra.3373s0054 10.0kb downstream 10.0kb downstream 10816 true Scaffold3373: 179252-190067 Capsella grandiflora
Cagra.3373s0054 10.0kb downstream 10.0kb downstream 10000 false Scaffold3373: 179252-189251 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121511389 5273 Angiosperm View MSA
122375811 5261 Brassicaceae View MSA
123801061 5264 Brassicales-Malvales View MSA
124298404 5266 SBM View MSA
124150055 5268 Malvidae View MSA
123875744 5270 Rosid View MSA
123459521 5271 Pentapetalae View MSA
122494911 5272 Eudicot View MSA
120784437 5274 Embryophyte View MSA
122826351 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain