Gene : Cagra.0094s0034 C. grandiflora v1.1
Defline:  (1 of 1) KOG0641 - WD40 repeat protein Genomic Order:  34
Name:  ? Cagra.0094s0034 Secondary Identifier:  ? PAC:28912407
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0094s0034 0.5kb upstream 0.5kb upstream 1661 true Scaffold94: 122188-123848 Capsella grandiflora
Cagra.0094s0034 0.5kb upstream 0.5kb upstream 500 false Scaffold94: 122188-122687 Capsella grandiflora
Cagra.0094s0034 0.5kb downstream 0.5kb downstream 1661 true Scaffold94: 122688-124348 Capsella grandiflora
Cagra.0094s0034 0.5kb downstream 0.5kb downstream 500 false Scaffold94: 123849-124348 Capsella grandiflora
Cagra.0094s0034 1.0kb upstream 1.0kb upstream 2161 true Scaffold94: 121688-123848 Capsella grandiflora
Cagra.0094s0034 1.0kb upstream 1.0kb upstream 1000 false Scaffold94: 121688-122687 Capsella grandiflora
Cagra.0094s0034 1.0kb downstream 1.0kb downstream 2161 true Scaffold94: 122688-124848 Capsella grandiflora
Cagra.0094s0034 1.0kb downstream 1.0kb downstream 1000 false Scaffold94: 123849-124848 Capsella grandiflora
Cagra.0094s0034 2.0kb upstream 2.0kb upstream 3161 true Scaffold94: 120688-123848 Capsella grandiflora
Cagra.0094s0034 2.0kb upstream 2.0kb upstream 2000 false Scaffold94: 120688-122687 Capsella grandiflora
Cagra.0094s0034 2.0kb downstream 2.0kb downstream 3161 true Scaffold94: 122688-125848 Capsella grandiflora
Cagra.0094s0034 2.0kb downstream 2.0kb downstream 2000 false Scaffold94: 123849-125848 Capsella grandiflora
Cagra.0094s0034 5.0kb upstream 5.0kb upstream 6161 true Scaffold94: 117688-123848 Capsella grandiflora
Cagra.0094s0034 5.0kb upstream 5.0kb upstream 5000 false Scaffold94: 117688-122687 Capsella grandiflora
Cagra.0094s0034 5.0kb downstream 5.0kb downstream 6161 true Scaffold94: 122688-128848 Capsella grandiflora
Cagra.0094s0034 5.0kb downstream 5.0kb downstream 5000 false Scaffold94: 123849-128848 Capsella grandiflora
Cagra.0094s0034 10.0kb upstream 10.0kb upstream 11161 true Scaffold94: 112688-123848 Capsella grandiflora
Cagra.0094s0034 10.0kb upstream 10.0kb upstream 10000 false Scaffold94: 112688-122687 Capsella grandiflora
Cagra.0094s0034 10.0kb downstream 10.0kb downstream 11161 true Scaffold94: 122688-133848 Capsella grandiflora
Cagra.0094s0034 10.0kb downstream 10.0kb downstream 10000 false Scaffold94: 123849-133848 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365827 5261 Brassicaceae View MSA
123837703 5264 Brassicales-Malvales View MSA
124342825 5266 SBM View MSA
124249786 5268 Malvidae View MSA
124051447 5270 Rosid View MSA
123749693 5271 Pentapetalae View MSA
122793878 5272 Eudicot View MSA
122043681 5273 Angiosperm View MSA
121350599 5274 Embryophyte View MSA
123427986 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain