Gene : Cagra.3356s0054 C. grandiflora v1.1
Defline:  (1 of 361) PF01535 - PPR repeat (PPR) Genomic Order:  54
Name:  ? Cagra.3356s0054 Secondary Identifier:  ? PAC:28898163
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3356s0054 0.5kb upstream 0.5kb upstream 2426 true Scaffold3356: 209496-211921 Capsella grandiflora
Cagra.3356s0054 0.5kb upstream 0.5kb upstream 500 false Scaffold3356: 209496-209995 Capsella grandiflora
Cagra.3356s0054 0.5kb downstream 0.5kb downstream 2426 true Scaffold3356: 209996-212421 Capsella grandiflora
Cagra.3356s0054 0.5kb downstream 0.5kb downstream 500 false Scaffold3356: 211922-212421 Capsella grandiflora
Cagra.3356s0054 1.0kb upstream 1.0kb upstream 2926 true Scaffold3356: 208996-211921 Capsella grandiflora
Cagra.3356s0054 1.0kb upstream 1.0kb upstream 1000 false Scaffold3356: 208996-209995 Capsella grandiflora
Cagra.3356s0054 1.0kb downstream 1.0kb downstream 2926 true Scaffold3356: 209996-212921 Capsella grandiflora
Cagra.3356s0054 1.0kb downstream 1.0kb downstream 1000 false Scaffold3356: 211922-212921 Capsella grandiflora
Cagra.3356s0054 2.0kb upstream 2.0kb upstream 3926 true Scaffold3356: 207996-211921 Capsella grandiflora
Cagra.3356s0054 2.0kb upstream 2.0kb upstream 2000 false Scaffold3356: 207996-209995 Capsella grandiflora
Cagra.3356s0054 2.0kb downstream 2.0kb downstream 3926 true Scaffold3356: 209996-213921 Capsella grandiflora
Cagra.3356s0054 2.0kb downstream 2.0kb downstream 2000 false Scaffold3356: 211922-213921 Capsella grandiflora
Cagra.3356s0054 5.0kb upstream 5.0kb upstream 6926 true Scaffold3356: 204996-211921 Capsella grandiflora
Cagra.3356s0054 5.0kb upstream 5.0kb upstream 5000 false Scaffold3356: 204996-209995 Capsella grandiflora
Cagra.3356s0054 5.0kb downstream 5.0kb downstream 6926 true Scaffold3356: 209996-216921 Capsella grandiflora
Cagra.3356s0054 5.0kb downstream 5.0kb downstream 5000 false Scaffold3356: 211922-216921 Capsella grandiflora
Cagra.3356s0054 10.0kb upstream 10.0kb upstream 11926 true Scaffold3356: 199996-211921 Capsella grandiflora
Cagra.3356s0054 10.0kb upstream 10.0kb upstream 10000 false Scaffold3356: 199996-209995 Capsella grandiflora
Cagra.3356s0054 10.0kb downstream 10.0kb downstream 11926 true Scaffold3356: 209996-221921 Capsella grandiflora
Cagra.3356s0054 10.0kb downstream 10.0kb downstream 10000 false Scaffold3356: 211922-221921 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378464 5261 Brassicaceae View MSA
123836826 5264 Brassicales-Malvales View MSA
124346825 5266 SBM View MSA
124246322 5268 Malvidae View MSA
124050530 5270 Rosid View MSA
123748641 5271 Pentapetalae View MSA
122794556 5272 Eudicot View MSA
122048850 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351271 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain