Gene : Cagra.3356s0087 C. grandiflora v1.1
Defline:  (1 of 126) PTHR14155 - RING FINGER DOMAIN-CONTAINING Genomic Order:  87
Name:  ? Cagra.3356s0087 Secondary Identifier:  ? PAC:28898138
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3356s0087 0.5kb upstream 0.5kb upstream 1379 true Scaffold3356: 353194-354572 Capsella grandiflora
Cagra.3356s0087 0.5kb upstream 0.5kb upstream 500 false Scaffold3356: 354073-354572 Capsella grandiflora
Cagra.3356s0087 0.5kb downstream 0.5kb downstream 1379 true Scaffold3356: 352694-354072 Capsella grandiflora
Cagra.3356s0087 0.5kb downstream 0.5kb downstream 500 false Scaffold3356: 352694-353193 Capsella grandiflora
Cagra.3356s0087 1.0kb upstream 1.0kb upstream 1879 true Scaffold3356: 353194-355072 Capsella grandiflora
Cagra.3356s0087 1.0kb upstream 1.0kb upstream 1000 false Scaffold3356: 354073-355072 Capsella grandiflora
Cagra.3356s0087 1.0kb downstream 1.0kb downstream 1879 true Scaffold3356: 352194-354072 Capsella grandiflora
Cagra.3356s0087 1.0kb downstream 1.0kb downstream 1000 false Scaffold3356: 352194-353193 Capsella grandiflora
Cagra.3356s0087 2.0kb upstream 2.0kb upstream 2879 true Scaffold3356: 353194-356072 Capsella grandiflora
Cagra.3356s0087 2.0kb upstream 2.0kb upstream 2000 false Scaffold3356: 354073-356072 Capsella grandiflora
Cagra.3356s0087 2.0kb downstream 2.0kb downstream 2879 true Scaffold3356: 351194-354072 Capsella grandiflora
Cagra.3356s0087 2.0kb downstream 2.0kb downstream 2000 false Scaffold3356: 351194-353193 Capsella grandiflora
Cagra.3356s0087 5.0kb upstream 5.0kb upstream 5879 true Scaffold3356: 353194-359072 Capsella grandiflora
Cagra.3356s0087 5.0kb upstream 5.0kb upstream 5000 false Scaffold3356: 354073-359072 Capsella grandiflora
Cagra.3356s0087 5.0kb downstream 5.0kb downstream 5879 true Scaffold3356: 348194-354072 Capsella grandiflora
Cagra.3356s0087 5.0kb downstream 5.0kb downstream 5000 false Scaffold3356: 348194-353193 Capsella grandiflora
Cagra.3356s0087 10.0kb upstream 10.0kb upstream 10879 true Scaffold3356: 353194-364072 Capsella grandiflora
Cagra.3356s0087 10.0kb upstream 10.0kb upstream 10000 false Scaffold3356: 354073-364072 Capsella grandiflora
Cagra.3356s0087 10.0kb downstream 10.0kb downstream 10879 true Scaffold3356: 343194-354072 Capsella grandiflora
Cagra.3356s0087 10.0kb downstream 10.0kb downstream 10000 false Scaffold3356: 343194-353193 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376148 5261 Brassicaceae View MSA
123836086 5264 Brassicales-Malvales View MSA
124341281 5266 SBM View MSA
124244919 5268 Malvidae View MSA
124050412 5270 Rosid View MSA
123751014 5271 Pentapetalae View MSA
122788959 5272 Eudicot View MSA
122044567 5273 Angiosperm View MSA
121310312 5274 Embryophyte View MSA
123347829 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain