Gene : Cagra.3356s0080 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11514:SF43 - TRANSCRIPTION FACTOR MYC3-RELATED Genomic Order:  80
Name:  ? Cagra.3356s0080 Secondary Identifier:  ? PAC:28898176
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3356s0080 0.5kb upstream 0.5kb upstream 2718 true Scaffold3356: 326901-329618 Capsella grandiflora
Cagra.3356s0080 0.5kb upstream 0.5kb upstream 500 false Scaffold3356: 329119-329618 Capsella grandiflora
Cagra.3356s0080 0.5kb downstream 0.5kb downstream 2718 true Scaffold3356: 326401-329118 Capsella grandiflora
Cagra.3356s0080 0.5kb downstream 0.5kb downstream 500 false Scaffold3356: 326401-326900 Capsella grandiflora
Cagra.3356s0080 1.0kb upstream 1.0kb upstream 3218 true Scaffold3356: 326901-330118 Capsella grandiflora
Cagra.3356s0080 1.0kb upstream 1.0kb upstream 1000 false Scaffold3356: 329119-330118 Capsella grandiflora
Cagra.3356s0080 1.0kb downstream 1.0kb downstream 3218 true Scaffold3356: 325901-329118 Capsella grandiflora
Cagra.3356s0080 1.0kb downstream 1.0kb downstream 1000 false Scaffold3356: 325901-326900 Capsella grandiflora
Cagra.3356s0080 2.0kb upstream 2.0kb upstream 4218 true Scaffold3356: 326901-331118 Capsella grandiflora
Cagra.3356s0080 2.0kb upstream 2.0kb upstream 2000 false Scaffold3356: 329119-331118 Capsella grandiflora
Cagra.3356s0080 2.0kb downstream 2.0kb downstream 4218 true Scaffold3356: 324901-329118 Capsella grandiflora
Cagra.3356s0080 2.0kb downstream 2.0kb downstream 2000 false Scaffold3356: 324901-326900 Capsella grandiflora
Cagra.3356s0080 5.0kb upstream 5.0kb upstream 7218 true Scaffold3356: 326901-334118 Capsella grandiflora
Cagra.3356s0080 5.0kb upstream 5.0kb upstream 5000 false Scaffold3356: 329119-334118 Capsella grandiflora
Cagra.3356s0080 5.0kb downstream 5.0kb downstream 7218 true Scaffold3356: 321901-329118 Capsella grandiflora
Cagra.3356s0080 5.0kb downstream 5.0kb downstream 5000 false Scaffold3356: 321901-326900 Capsella grandiflora
Cagra.3356s0080 10.0kb upstream 10.0kb upstream 12218 true Scaffold3356: 326901-339118 Capsella grandiflora
Cagra.3356s0080 10.0kb upstream 10.0kb upstream 10000 false Scaffold3356: 329119-339118 Capsella grandiflora
Cagra.3356s0080 10.0kb downstream 10.0kb downstream 12218 true Scaffold3356: 316901-329118 Capsella grandiflora
Cagra.3356s0080 10.0kb downstream 10.0kb downstream 10000 false Scaffold3356: 316901-326900 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374845 5261 Brassicaceae View MSA
123836431 5264 Brassicales-Malvales View MSA
124322162 5266 SBM View MSA
124169090 5268 Malvidae View MSA
124072195 5270 Rosid View MSA
123752263 5271 Pentapetalae View MSA
122797148 5272 Eudicot View MSA
122048135 5273 Angiosperm View MSA
121351644 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain