Gene : Cagra.0096s0075 C. grandiflora v1.1
Defline:  (1 of 32) PTHR10015 - HEAT SHOCK TRANSCRIPTION FACTOR Genomic Order:  75
Name:  ? Cagra.0096s0075 Secondary Identifier:  ? PAC:28897009
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0096s0075 0.5kb upstream 0.5kb upstream 1001 true Scaffold96: 368064-369064 Capsella grandiflora
Cagra.0096s0075 0.5kb upstream 0.5kb upstream 500 false Scaffold96: 368565-369064 Capsella grandiflora
Cagra.0096s0075 0.5kb downstream 0.5kb downstream 1001 true Scaffold96: 367564-368564 Capsella grandiflora
Cagra.0096s0075 0.5kb downstream 0.5kb downstream 500 false Scaffold96: 367564-368063 Capsella grandiflora
Cagra.0096s0075 1.0kb upstream 1.0kb upstream 1501 true Scaffold96: 368064-369564 Capsella grandiflora
Cagra.0096s0075 1.0kb upstream 1.0kb upstream 1000 false Scaffold96: 368565-369564 Capsella grandiflora
Cagra.0096s0075 1.0kb downstream 1.0kb downstream 1501 true Scaffold96: 367064-368564 Capsella grandiflora
Cagra.0096s0075 1.0kb downstream 1.0kb downstream 1000 false Scaffold96: 367064-368063 Capsella grandiflora
Cagra.0096s0075 2.0kb upstream 2.0kb upstream 2501 true Scaffold96: 368064-370564 Capsella grandiflora
Cagra.0096s0075 2.0kb upstream 2.0kb upstream 2000 false Scaffold96: 368565-370564 Capsella grandiflora
Cagra.0096s0075 2.0kb downstream 2.0kb downstream 2501 true Scaffold96: 366064-368564 Capsella grandiflora
Cagra.0096s0075 2.0kb downstream 2.0kb downstream 2000 false Scaffold96: 366064-368063 Capsella grandiflora
Cagra.0096s0075 5.0kb upstream 5.0kb upstream 5501 true Scaffold96: 368064-373564 Capsella grandiflora
Cagra.0096s0075 5.0kb upstream 5.0kb upstream 5000 false Scaffold96: 368565-373564 Capsella grandiflora
Cagra.0096s0075 5.0kb downstream 5.0kb downstream 5501 true Scaffold96: 363064-368564 Capsella grandiflora
Cagra.0096s0075 5.0kb downstream 5.0kb downstream 5000 false Scaffold96: 363064-368063 Capsella grandiflora
Cagra.0096s0075 10.0kb upstream 10.0kb upstream 10501 true Scaffold96: 368064-378564 Capsella grandiflora
Cagra.0096s0075 10.0kb upstream 10.0kb upstream 10000 false Scaffold96: 368565-378564 Capsella grandiflora
Cagra.0096s0075 10.0kb downstream 10.0kb downstream 10501 true Scaffold96: 358064-368564 Capsella grandiflora
Cagra.0096s0075 10.0kb downstream 10.0kb downstream 10000 false Scaffold96: 358064-368063 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380981 5261 Brassicaceae View MSA
123802997 5264 Brassicales-Malvales View MSA
124300140 5266 SBM View MSA
124151394 5268 Malvidae View MSA
124074457 5270 Rosid View MSA
123749561 5271 Pentapetalae View MSA
122794562 5272 Eudicot View MSA
122050286 5273 Angiosperm View MSA
121349623 5274 Embryophyte View MSA
123428852 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain