Gene : Cagra.0090s0004 C. grandiflora v1.1
Defline:  (1 of 12) PF04759 - Protein of unknown function, DUF617 (DUF617) Genomic Order:  4
Name:  ? Cagra.0090s0004 Secondary Identifier:  ? PAC:28902676
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0090s0004 0.5kb upstream 0.5kb upstream 1268 true Scaffold90: 8868-10135 Capsella grandiflora
Cagra.0090s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold90: 8868-9367 Capsella grandiflora
Cagra.0090s0004 0.5kb downstream 0.5kb downstream 1268 true Scaffold90: 9368-10635 Capsella grandiflora
Cagra.0090s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold90: 10136-10635 Capsella grandiflora
Cagra.0090s0004 1.0kb upstream 1.0kb upstream 1768 true Scaffold90: 8368-10135 Capsella grandiflora
Cagra.0090s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold90: 8368-9367 Capsella grandiflora
Cagra.0090s0004 1.0kb downstream 1.0kb downstream 1768 true Scaffold90: 9368-11135 Capsella grandiflora
Cagra.0090s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold90: 10136-11135 Capsella grandiflora
Cagra.0090s0004 2.0kb upstream 2.0kb upstream 2768 true Scaffold90: 7368-10135 Capsella grandiflora
Cagra.0090s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold90: 7368-9367 Capsella grandiflora
Cagra.0090s0004 2.0kb downstream 2.0kb downstream 2768 true Scaffold90: 9368-12135 Capsella grandiflora
Cagra.0090s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold90: 10136-12135 Capsella grandiflora
Cagra.0090s0004 5.0kb upstream 5.0kb upstream 5768 true Scaffold90: 4368-10135 Capsella grandiflora
Cagra.0090s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold90: 4368-9367 Capsella grandiflora
Cagra.0090s0004 5.0kb downstream 5.0kb downstream 5768 true Scaffold90: 9368-15135 Capsella grandiflora
Cagra.0090s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold90: 10136-15135 Capsella grandiflora
Cagra.0090s0004 10.0kb upstream 10.0kb upstream 10135 true Scaffold90: 1-10135 Capsella grandiflora
Cagra.0090s0004 10.0kb upstream 10.0kb upstream 9367 false Scaffold90: 1-9367 Capsella grandiflora
Cagra.0090s0004 10.0kb downstream 10.0kb downstream 10768 true Scaffold90: 9368-20135 Capsella grandiflora
Cagra.0090s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold90: 10136-20135 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365539 5261 Brassicaceae View MSA
123840255 5264 Brassicales-Malvales View MSA
124337458 5266 SBM View MSA
124252626 5268 Malvidae View MSA
124068431 5270 Rosid View MSA
123751387 5271 Pentapetalae View MSA
122796767 5272 Eudicot View MSA
122047033 5273 Angiosperm View MSA
121349765 5274 Embryophyte View MSA
123381434 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain