Gene : Cagra.3517s0050 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31161:SF7 - F28N24.3 PROTEIN Genomic Order:  50
Name:  ? Cagra.3517s0050 Secondary Identifier:  ? PAC:28916893
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3517s0050 0.5kb upstream 0.5kb upstream 1928 true Scaffold3517: 179812-181739 Capsella grandiflora
Cagra.3517s0050 0.5kb upstream 0.5kb upstream 500 false Scaffold3517: 181240-181739 Capsella grandiflora
Cagra.3517s0050 0.5kb downstream 0.5kb downstream 1928 true Scaffold3517: 179312-181239 Capsella grandiflora
Cagra.3517s0050 0.5kb downstream 0.5kb downstream 500 false Scaffold3517: 179312-179811 Capsella grandiflora
Cagra.3517s0050 1.0kb upstream 1.0kb upstream 2428 true Scaffold3517: 179812-182239 Capsella grandiflora
Cagra.3517s0050 1.0kb upstream 1.0kb upstream 1000 false Scaffold3517: 181240-182239 Capsella grandiflora
Cagra.3517s0050 1.0kb downstream 1.0kb downstream 2428 true Scaffold3517: 178812-181239 Capsella grandiflora
Cagra.3517s0050 1.0kb downstream 1.0kb downstream 1000 false Scaffold3517: 178812-179811 Capsella grandiflora
Cagra.3517s0050 2.0kb upstream 2.0kb upstream 3428 true Scaffold3517: 179812-183239 Capsella grandiflora
Cagra.3517s0050 2.0kb upstream 2.0kb upstream 2000 false Scaffold3517: 181240-183239 Capsella grandiflora
Cagra.3517s0050 2.0kb downstream 2.0kb downstream 3428 true Scaffold3517: 177812-181239 Capsella grandiflora
Cagra.3517s0050 2.0kb downstream 2.0kb downstream 2000 false Scaffold3517: 177812-179811 Capsella grandiflora
Cagra.3517s0050 5.0kb upstream 5.0kb upstream 6428 true Scaffold3517: 179812-186239 Capsella grandiflora
Cagra.3517s0050 5.0kb upstream 5.0kb upstream 5000 false Scaffold3517: 181240-186239 Capsella grandiflora
Cagra.3517s0050 5.0kb downstream 5.0kb downstream 6428 true Scaffold3517: 174812-181239 Capsella grandiflora
Cagra.3517s0050 5.0kb downstream 5.0kb downstream 5000 false Scaffold3517: 174812-179811 Capsella grandiflora
Cagra.3517s0050 10.0kb upstream 10.0kb upstream 11428 true Scaffold3517: 179812-191239 Capsella grandiflora
Cagra.3517s0050 10.0kb upstream 10.0kb upstream 10000 false Scaffold3517: 181240-191239 Capsella grandiflora
Cagra.3517s0050 10.0kb downstream 10.0kb downstream 11428 true Scaffold3517: 169812-181239 Capsella grandiflora
Cagra.3517s0050 10.0kb downstream 10.0kb downstream 10000 false Scaffold3517: 169812-179811 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041109 5273 Angiosperm View MSA
122375102 5261 Brassicaceae View MSA
123830960 5264 Brassicales-Malvales View MSA
124344574 5266 SBM View MSA
124237286 5268 Malvidae View MSA
124063143 5270 Rosid View MSA
123743668 5271 Pentapetalae View MSA
122791275 5272 Eudicot View MSA
121351569 5274 Embryophyte View MSA
123382231 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain