Gene : Cagra.3474s0007 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31100:SF1 - AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 17-RELATED Genomic Order:  7
Name:  ? Cagra.3474s0007 Secondary Identifier:  ? PAC:28917923
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3474s0007 0.5kb upstream 0.5kb upstream 1328 true Scaffold3474: 43811-45138 Capsella grandiflora
Cagra.3474s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold3474: 44639-45138 Capsella grandiflora
Cagra.3474s0007 0.5kb downstream 0.5kb downstream 1328 true Scaffold3474: 43311-44638 Capsella grandiflora
Cagra.3474s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold3474: 43311-43810 Capsella grandiflora
Cagra.3474s0007 1.0kb upstream 1.0kb upstream 1828 true Scaffold3474: 43811-45638 Capsella grandiflora
Cagra.3474s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold3474: 44639-45638 Capsella grandiflora
Cagra.3474s0007 1.0kb downstream 1.0kb downstream 1828 true Scaffold3474: 42811-44638 Capsella grandiflora
Cagra.3474s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold3474: 42811-43810 Capsella grandiflora
Cagra.3474s0007 2.0kb upstream 2.0kb upstream 2828 true Scaffold3474: 43811-46638 Capsella grandiflora
Cagra.3474s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold3474: 44639-46638 Capsella grandiflora
Cagra.3474s0007 2.0kb downstream 2.0kb downstream 2828 true Scaffold3474: 41811-44638 Capsella grandiflora
Cagra.3474s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold3474: 41811-43810 Capsella grandiflora
Cagra.3474s0007 5.0kb upstream 5.0kb upstream 5828 true Scaffold3474: 43811-49638 Capsella grandiflora
Cagra.3474s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold3474: 44639-49638 Capsella grandiflora
Cagra.3474s0007 5.0kb downstream 5.0kb downstream 5828 true Scaffold3474: 38811-44638 Capsella grandiflora
Cagra.3474s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold3474: 38811-43810 Capsella grandiflora
Cagra.3474s0007 10.0kb upstream 10.0kb upstream 10828 true Scaffold3474: 43811-54638 Capsella grandiflora
Cagra.3474s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold3474: 44639-54638 Capsella grandiflora
Cagra.3474s0007 10.0kb downstream 10.0kb downstream 10828 true Scaffold3474: 33811-44638 Capsella grandiflora
Cagra.3474s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold3474: 33811-43810 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362424 5261 Brassicaceae View MSA
123829405 5264 Brassicales-Malvales View MSA
124340712 5266 SBM View MSA
124247789 5268 Malvidae View MSA
124070322 5270 Rosid View MSA
123746080 5271 Pentapetalae View MSA
122793213 5272 Eudicot View MSA
122046470 5273 Angiosperm View MSA
121310610 5274 Embryophyte View MSA
123348051 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain