Gene : Cagra.3501s0003 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31636:SF50 - DELLA PROTEIN GAI-RELATED Genomic Order:  3
Name:  ? Cagra.3501s0003 Secondary Identifier:  ? PAC:28902325
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3501s0003 0.5kb upstream 0.5kb upstream 2087 true Scaffold3501: 4376-6462 Capsella grandiflora
Cagra.3501s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold3501: 5963-6462 Capsella grandiflora
Cagra.3501s0003 0.5kb downstream 0.5kb downstream 2087 true Scaffold3501: 3876-5962 Capsella grandiflora
Cagra.3501s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold3501: 3876-4375 Capsella grandiflora
Cagra.3501s0003 1.0kb upstream 1.0kb upstream 2587 true Scaffold3501: 4376-6962 Capsella grandiflora
Cagra.3501s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold3501: 5963-6962 Capsella grandiflora
Cagra.3501s0003 1.0kb downstream 1.0kb downstream 2587 true Scaffold3501: 3376-5962 Capsella grandiflora
Cagra.3501s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold3501: 3376-4375 Capsella grandiflora
Cagra.3501s0003 2.0kb upstream 2.0kb upstream 3587 true Scaffold3501: 4376-7962 Capsella grandiflora
Cagra.3501s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold3501: 5963-7962 Capsella grandiflora
Cagra.3501s0003 2.0kb downstream 2.0kb downstream 3587 true Scaffold3501: 2376-5962 Capsella grandiflora
Cagra.3501s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold3501: 2376-4375 Capsella grandiflora
Cagra.3501s0003 5.0kb upstream 5.0kb upstream 6587 true Scaffold3501: 4376-10962 Capsella grandiflora
Cagra.3501s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold3501: 5963-10962 Capsella grandiflora
Cagra.3501s0003 5.0kb downstream 5.0kb downstream 5962 true Scaffold3501: 1-5962 Capsella grandiflora
Cagra.3501s0003 5.0kb downstream 5.0kb downstream 4375 false Scaffold3501: 1-4375 Capsella grandiflora
Cagra.3501s0003 10.0kb upstream 10.0kb upstream 11587 true Scaffold3501: 4376-15962 Capsella grandiflora
Cagra.3501s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold3501: 5963-15962 Capsella grandiflora
Cagra.3501s0003 10.0kb downstream 10.0kb downstream 5962 true Scaffold3501: 1-5962 Capsella grandiflora
Cagra.3501s0003 10.0kb downstream 10.0kb downstream 4375 false Scaffold3501: 1-4375 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376910 5261 Brassicaceae View MSA
123801393 5264 Brassicales-Malvales View MSA
124298701 5266 SBM View MSA
124150281 5268 Malvidae View MSA
124070083 5270 Rosid View MSA
123746513 5271 Pentapetalae View MSA
122796681 5272 Eudicot View MSA
122044707 5273 Angiosperm View MSA
121350442 5274 Embryophyte View MSA
123381734 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain