Gene : Cagra.0342s0002 C. grandiflora v1.1
Defline:  (1 of 2) 2.3.1.133//2.3.1.99 - Quinate O-hydroxycinnamoyltransferase / Hydroxycinnamoyl coenzyme A-quinate transferase Genomic Order:  2
Name:  ? Cagra.0342s0002 Secondary Identifier:  ? PAC:28909886
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-361 Capsella grandiflora pathologic  
Cgrandiflora PWY-6039 Capsella grandiflora pathologic  
Cgrandiflora PWY-6040 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0342s0002 0.5kb upstream 0.5kb upstream 2077 true Scaffold342: 2026-4102 Capsella grandiflora
Cagra.0342s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold342: 3603-4102 Capsella grandiflora
Cagra.0342s0002 0.5kb downstream 0.5kb downstream 2077 true Scaffold342: 1526-3602 Capsella grandiflora
Cagra.0342s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold342: 1526-2025 Capsella grandiflora
Cagra.0342s0002 1.0kb upstream 1.0kb upstream 2577 true Scaffold342: 2026-4602 Capsella grandiflora
Cagra.0342s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold342: 3603-4602 Capsella grandiflora
Cagra.0342s0002 1.0kb downstream 1.0kb downstream 2577 true Scaffold342: 1026-3602 Capsella grandiflora
Cagra.0342s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold342: 1026-2025 Capsella grandiflora
Cagra.0342s0002 2.0kb upstream 2.0kb upstream 3577 true Scaffold342: 2026-5602 Capsella grandiflora
Cagra.0342s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold342: 3603-5602 Capsella grandiflora
Cagra.0342s0002 2.0kb downstream 2.0kb downstream 3577 true Scaffold342: 26-3602 Capsella grandiflora
Cagra.0342s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold342: 26-2025 Capsella grandiflora
Cagra.0342s0002 5.0kb upstream 5.0kb upstream 6577 true Scaffold342: 2026-8602 Capsella grandiflora
Cagra.0342s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold342: 3603-8602 Capsella grandiflora
Cagra.0342s0002 5.0kb downstream 5.0kb downstream 3602 true Scaffold342: 1-3602 Capsella grandiflora
Cagra.0342s0002 5.0kb downstream 5.0kb downstream 2025 false Scaffold342: 1-2025 Capsella grandiflora
Cagra.0342s0002 10.0kb upstream 10.0kb upstream 11577 true Scaffold342: 2026-13602 Capsella grandiflora
Cagra.0342s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold342: 3603-13602 Capsella grandiflora
Cagra.0342s0002 10.0kb downstream 10.0kb downstream 3602 true Scaffold342: 1-3602 Capsella grandiflora
Cagra.0342s0002 10.0kb downstream 10.0kb downstream 2025 false Scaffold342: 1-2025 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367641 5261 Brassicaceae View MSA
123841407 5264 Brassicales-Malvales View MSA
124349927 5266 SBM View MSA
124250776 5268 Malvidae View MSA
124061050 5270 Rosid View MSA
123747860 5271 Pentapetalae View MSA
122791254 5272 Eudicot View MSA
122051643 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain