Gene : Cagra.0342s0007 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31444:SF8 - PROTEIN IRREGULAR XYLEM 15-RELATED Genomic Order:  7
Name:  ? Cagra.0342s0007 Secondary Identifier:  ? PAC:28909884
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0342s0007 0.5kb upstream 0.5kb upstream 1689 true Scaffold342: 24397-26085 Capsella grandiflora
Cagra.0342s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold342: 24397-24896 Capsella grandiflora
Cagra.0342s0007 0.5kb downstream 0.5kb downstream 1689 true Scaffold342: 24897-26585 Capsella grandiflora
Cagra.0342s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold342: 26086-26585 Capsella grandiflora
Cagra.0342s0007 1.0kb upstream 1.0kb upstream 2189 true Scaffold342: 23897-26085 Capsella grandiflora
Cagra.0342s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold342: 23897-24896 Capsella grandiflora
Cagra.0342s0007 1.0kb downstream 1.0kb downstream 2189 true Scaffold342: 24897-27085 Capsella grandiflora
Cagra.0342s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold342: 26086-27085 Capsella grandiflora
Cagra.0342s0007 2.0kb upstream 2.0kb upstream 3189 true Scaffold342: 22897-26085 Capsella grandiflora
Cagra.0342s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold342: 22897-24896 Capsella grandiflora
Cagra.0342s0007 2.0kb downstream 2.0kb downstream 3189 true Scaffold342: 24897-28085 Capsella grandiflora
Cagra.0342s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold342: 26086-28085 Capsella grandiflora
Cagra.0342s0007 5.0kb upstream 5.0kb upstream 6189 true Scaffold342: 19897-26085 Capsella grandiflora
Cagra.0342s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold342: 19897-24896 Capsella grandiflora
Cagra.0342s0007 5.0kb downstream 5.0kb downstream 6189 true Scaffold342: 24897-31085 Capsella grandiflora
Cagra.0342s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold342: 26086-31085 Capsella grandiflora
Cagra.0342s0007 10.0kb upstream 10.0kb upstream 11189 true Scaffold342: 14897-26085 Capsella grandiflora
Cagra.0342s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold342: 14897-24896 Capsella grandiflora
Cagra.0342s0007 10.0kb downstream 10.0kb downstream 11189 true Scaffold342: 24897-36085 Capsella grandiflora
Cagra.0342s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold342: 26086-36085 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361817 5261 Brassicaceae View MSA
123840047 5264 Brassicales-Malvales View MSA
124338765 5266 SBM View MSA
124239405 5268 Malvidae View MSA
124065535 5270 Rosid View MSA
123740202 5271 Pentapetalae View MSA
122788452 5272 Eudicot View MSA
122042282 5273 Angiosperm View MSA
121349069 5274 Embryophyte View MSA
123381149 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain