Gene : Cagra.3462s0001 C. grandiflora v1.1
Defline:  (1 of 43) PF13912 - C2H2-type zinc finger (zf-C2H2_6) Genomic Order:  1
Name:  ? Cagra.3462s0001 Secondary Identifier:  ? PAC:28911954
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3462s0001 0.5kb upstream 0.5kb upstream 1121 true Scaffold3462: 372-1492 Capsella grandiflora
Cagra.3462s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold3462: 372-871 Capsella grandiflora
Cagra.3462s0001 0.5kb downstream 0.5kb downstream 1121 true Scaffold3462: 872-1992 Capsella grandiflora
Cagra.3462s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold3462: 1493-1992 Capsella grandiflora
Cagra.3462s0001 1.0kb upstream 1.0kb upstream 1492 true Scaffold3462: 1-1492 Capsella grandiflora
Cagra.3462s0001 1.0kb upstream 1.0kb upstream 871 false Scaffold3462: 1-871 Capsella grandiflora
Cagra.3462s0001 1.0kb downstream 1.0kb downstream 1621 true Scaffold3462: 872-2492 Capsella grandiflora
Cagra.3462s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold3462: 1493-2492 Capsella grandiflora
Cagra.3462s0001 2.0kb upstream 2.0kb upstream 1492 true Scaffold3462: 1-1492 Capsella grandiflora
Cagra.3462s0001 2.0kb upstream 2.0kb upstream 871 false Scaffold3462: 1-871 Capsella grandiflora
Cagra.3462s0001 2.0kb downstream 2.0kb downstream 1651 true Scaffold3462: 872-2522 Capsella grandiflora
Cagra.3462s0001 2.0kb downstream 2.0kb downstream 1030 false Scaffold3462: 1493-2522 Capsella grandiflora
Cagra.3462s0001 5.0kb upstream 5.0kb upstream 1492 true Scaffold3462: 1-1492 Capsella grandiflora
Cagra.3462s0001 5.0kb upstream 5.0kb upstream 871 false Scaffold3462: 1-871 Capsella grandiflora
Cagra.3462s0001 5.0kb downstream 5.0kb downstream 1651 true Scaffold3462: 872-2522 Capsella grandiflora
Cagra.3462s0001 5.0kb downstream 5.0kb downstream 1030 false Scaffold3462: 1493-2522 Capsella grandiflora
Cagra.3462s0001 10.0kb upstream 10.0kb upstream 1492 true Scaffold3462: 1-1492 Capsella grandiflora
Cagra.3462s0001 10.0kb upstream 10.0kb upstream 871 false Scaffold3462: 1-871 Capsella grandiflora
Cagra.3462s0001 10.0kb downstream 10.0kb downstream 1651 true Scaffold3462: 872-2522 Capsella grandiflora
Cagra.3462s0001 10.0kb downstream 10.0kb downstream 1030 false Scaffold3462: 1493-2522 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360812 5261 Brassicaceae View MSA
123835998 5264 Brassicales-Malvales View MSA
124346954 5266 SBM View MSA
124237516 5268 Malvidae View MSA
124063773 5270 Rosid View MSA
123750895 5271 Pentapetalae View MSA
122785947 5272 Eudicot View MSA
122049526 5273 Angiosperm View MSA
121348741 5274 Embryophyte View MSA
123380998 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain