Gene : Cagra.3744s0007 C. grandiflora v1.1
Defline:  (1 of 3) PTHR22763:SF63 - C3HC4 TYPE ZINC-FINGER PROTEIN-RELATED Genomic Order:  7
Name:  ? Cagra.3744s0007 Secondary Identifier:  ? PAC:28900826
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3744s0007 0.5kb upstream 0.5kb upstream 1118 true Scaffold3744: 17377-18494 Capsella grandiflora
Cagra.3744s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold3744: 17995-18494 Capsella grandiflora
Cagra.3744s0007 0.5kb downstream 0.5kb downstream 1118 true Scaffold3744: 16877-17994 Capsella grandiflora
Cagra.3744s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold3744: 16877-17376 Capsella grandiflora
Cagra.3744s0007 1.0kb upstream 1.0kb upstream 1618 true Scaffold3744: 17377-18994 Capsella grandiflora
Cagra.3744s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold3744: 17995-18994 Capsella grandiflora
Cagra.3744s0007 1.0kb downstream 1.0kb downstream 1618 true Scaffold3744: 16377-17994 Capsella grandiflora
Cagra.3744s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold3744: 16377-17376 Capsella grandiflora
Cagra.3744s0007 2.0kb upstream 2.0kb upstream 2618 true Scaffold3744: 17377-19994 Capsella grandiflora
Cagra.3744s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold3744: 17995-19994 Capsella grandiflora
Cagra.3744s0007 2.0kb downstream 2.0kb downstream 2618 true Scaffold3744: 15377-17994 Capsella grandiflora
Cagra.3744s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold3744: 15377-17376 Capsella grandiflora
Cagra.3744s0007 5.0kb upstream 5.0kb upstream 5618 true Scaffold3744: 17377-22994 Capsella grandiflora
Cagra.3744s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold3744: 17995-22994 Capsella grandiflora
Cagra.3744s0007 5.0kb downstream 5.0kb downstream 5618 true Scaffold3744: 12377-17994 Capsella grandiflora
Cagra.3744s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold3744: 12377-17376 Capsella grandiflora
Cagra.3744s0007 10.0kb upstream 10.0kb upstream 10618 true Scaffold3744: 17377-27994 Capsella grandiflora
Cagra.3744s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold3744: 17995-27994 Capsella grandiflora
Cagra.3744s0007 10.0kb downstream 10.0kb downstream 10618 true Scaffold3744: 7377-17994 Capsella grandiflora
Cagra.3744s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold3744: 7377-17376 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379665 5261 Brassicaceae View MSA
123802372 5264 Brassicales-Malvales View MSA
124346586 5266 SBM View MSA
124248129 5268 Malvidae View MSA
124074172 5270 Rosid View MSA
123753748 5271 Pentapetalae View MSA
122797850 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain