Gene : Cagra.3744s0006 C. grandiflora v1.1
Defline:  (1 of 3) PTHR22763:SF63 - C3HC4 TYPE ZINC-FINGER PROTEIN-RELATED Genomic Order:  6
Name:  ? Cagra.3744s0006 Secondary Identifier:  ? PAC:28900831
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3744s0006 0.5kb upstream 0.5kb upstream 1139 true Scaffold3744: 16173-17311 Capsella grandiflora
Cagra.3744s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold3744: 16812-17311 Capsella grandiflora
Cagra.3744s0006 0.5kb downstream 0.5kb downstream 1139 true Scaffold3744: 15673-16811 Capsella grandiflora
Cagra.3744s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold3744: 15673-16172 Capsella grandiflora
Cagra.3744s0006 1.0kb upstream 1.0kb upstream 1639 true Scaffold3744: 16173-17811 Capsella grandiflora
Cagra.3744s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold3744: 16812-17811 Capsella grandiflora
Cagra.3744s0006 1.0kb downstream 1.0kb downstream 1639 true Scaffold3744: 15173-16811 Capsella grandiflora
Cagra.3744s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold3744: 15173-16172 Capsella grandiflora
Cagra.3744s0006 2.0kb upstream 2.0kb upstream 2639 true Scaffold3744: 16173-18811 Capsella grandiflora
Cagra.3744s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold3744: 16812-18811 Capsella grandiflora
Cagra.3744s0006 2.0kb downstream 2.0kb downstream 2639 true Scaffold3744: 14173-16811 Capsella grandiflora
Cagra.3744s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold3744: 14173-16172 Capsella grandiflora
Cagra.3744s0006 5.0kb upstream 5.0kb upstream 5639 true Scaffold3744: 16173-21811 Capsella grandiflora
Cagra.3744s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold3744: 16812-21811 Capsella grandiflora
Cagra.3744s0006 5.0kb downstream 5.0kb downstream 5639 true Scaffold3744: 11173-16811 Capsella grandiflora
Cagra.3744s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold3744: 11173-16172 Capsella grandiflora
Cagra.3744s0006 10.0kb upstream 10.0kb upstream 10639 true Scaffold3744: 16173-26811 Capsella grandiflora
Cagra.3744s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold3744: 16812-26811 Capsella grandiflora
Cagra.3744s0006 10.0kb downstream 10.0kb downstream 10639 true Scaffold3744: 6173-16811 Capsella grandiflora
Cagra.3744s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold3744: 6173-16172 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379665 5261 Brassicaceae View MSA
123802372 5264 Brassicales-Malvales View MSA
124346586 5266 SBM View MSA
124248129 5268 Malvidae View MSA
124074172 5270 Rosid View MSA
123753748 5271 Pentapetalae View MSA
122797850 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain