Gene : Cagra.3631s0005 C. grandiflora v1.1
Defline:  (1 of 3) PTHR31307:SF4 - 6B-INTERACTING PROTEIN 1-LIKE 1-RELATED Genomic Order:  5
Name:  ? Cagra.3631s0005 Secondary Identifier:  ? PAC:28917707
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3631s0005 0.5kb upstream 0.5kb upstream 2616 true Scaffold3631: 4632-7247 Capsella grandiflora
Cagra.3631s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold3631: 4632-5131 Capsella grandiflora
Cagra.3631s0005 0.5kb downstream 0.5kb downstream 2616 true Scaffold3631: 5132-7747 Capsella grandiflora
Cagra.3631s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold3631: 7248-7747 Capsella grandiflora
Cagra.3631s0005 1.0kb upstream 1.0kb upstream 3116 true Scaffold3631: 4132-7247 Capsella grandiflora
Cagra.3631s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold3631: 4132-5131 Capsella grandiflora
Cagra.3631s0005 1.0kb downstream 1.0kb downstream 3116 true Scaffold3631: 5132-8247 Capsella grandiflora
Cagra.3631s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold3631: 7248-8247 Capsella grandiflora
Cagra.3631s0005 2.0kb upstream 2.0kb upstream 4116 true Scaffold3631: 3132-7247 Capsella grandiflora
Cagra.3631s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold3631: 3132-5131 Capsella grandiflora
Cagra.3631s0005 2.0kb downstream 2.0kb downstream 4116 true Scaffold3631: 5132-9247 Capsella grandiflora
Cagra.3631s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold3631: 7248-9247 Capsella grandiflora
Cagra.3631s0005 5.0kb upstream 5.0kb upstream 7116 true Scaffold3631: 132-7247 Capsella grandiflora
Cagra.3631s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold3631: 132-5131 Capsella grandiflora
Cagra.3631s0005 5.0kb downstream 5.0kb downstream 7116 true Scaffold3631: 5132-12247 Capsella grandiflora
Cagra.3631s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold3631: 7248-12247 Capsella grandiflora
Cagra.3631s0005 10.0kb upstream 10.0kb upstream 7247 true Scaffold3631: 1-7247 Capsella grandiflora
Cagra.3631s0005 10.0kb upstream 10.0kb upstream 5131 false Scaffold3631: 1-5131 Capsella grandiflora
Cagra.3631s0005 10.0kb downstream 10.0kb downstream 12116 true Scaffold3631: 5132-17247 Capsella grandiflora
Cagra.3631s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold3631: 7248-17247 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375463 5261 Brassicaceae View MSA
123800959 5264 Brassicales-Malvales View MSA
124298311 5266 SBM View MSA
124244795 5268 Malvidae View MSA
124067837 5270 Rosid View MSA
123743560 5271 Pentapetalae View MSA
122785837 5272 Eudicot View MSA
122048204 5273 Angiosperm View MSA
121351505 5274 Embryophyte View MSA
123382195 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain