Gene : Cagra.3641s0005 C. grandiflora v1.1
Defline:  (1 of 6) PTHR14155//PTHR14155:SF106 - RING FINGER DOMAIN-CONTAINING Genomic Order:  5
Name:  ? Cagra.3641s0005 Secondary Identifier:  ? PAC:28906235
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3641s0005 0.5kb upstream 0.5kb upstream 1416 true Scaffold3641: 19680-21095 Capsella grandiflora
Cagra.3641s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold3641: 19680-20179 Capsella grandiflora
Cagra.3641s0005 0.5kb downstream 0.5kb downstream 1416 true Scaffold3641: 20180-21595 Capsella grandiflora
Cagra.3641s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold3641: 21096-21595 Capsella grandiflora
Cagra.3641s0005 1.0kb upstream 1.0kb upstream 1916 true Scaffold3641: 19180-21095 Capsella grandiflora
Cagra.3641s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold3641: 19180-20179 Capsella grandiflora
Cagra.3641s0005 1.0kb downstream 1.0kb downstream 1916 true Scaffold3641: 20180-22095 Capsella grandiflora
Cagra.3641s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold3641: 21096-22095 Capsella grandiflora
Cagra.3641s0005 2.0kb upstream 2.0kb upstream 2916 true Scaffold3641: 18180-21095 Capsella grandiflora
Cagra.3641s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold3641: 18180-20179 Capsella grandiflora
Cagra.3641s0005 2.0kb downstream 2.0kb downstream 2916 true Scaffold3641: 20180-23095 Capsella grandiflora
Cagra.3641s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold3641: 21096-23095 Capsella grandiflora
Cagra.3641s0005 5.0kb upstream 5.0kb upstream 5916 true Scaffold3641: 15180-21095 Capsella grandiflora
Cagra.3641s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold3641: 15180-20179 Capsella grandiflora
Cagra.3641s0005 5.0kb downstream 5.0kb downstream 5916 true Scaffold3641: 20180-26095 Capsella grandiflora
Cagra.3641s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold3641: 21096-26095 Capsella grandiflora
Cagra.3641s0005 10.0kb upstream 10.0kb upstream 10916 true Scaffold3641: 10180-21095 Capsella grandiflora
Cagra.3641s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold3641: 10180-20179 Capsella grandiflora
Cagra.3641s0005 10.0kb downstream 10.0kb downstream 10916 true Scaffold3641: 20180-31095 Capsella grandiflora
Cagra.3641s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold3641: 21096-31095 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378179 5261 Brassicaceae View MSA
123831718 5264 Brassicales-Malvales View MSA
124339605 5266 SBM View MSA
124251488 5268 Malvidae View MSA
124073720 5270 Rosid View MSA
123747285 5271 Pentapetalae View MSA
122796390 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain