Gene : Cagra.3675s0006 C. grandiflora v1.1
Defline:  (1 of 132) PF00847 - AP2 domain (AP2) Genomic Order:  6
Name:  ? Cagra.3675s0006 Secondary Identifier:  ? PAC:28900863
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3675s0006 0.5kb upstream 0.5kb upstream 1473 true Scaffold3675: 16529-18001 Capsella grandiflora
Cagra.3675s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold3675: 17502-18001 Capsella grandiflora
Cagra.3675s0006 0.5kb downstream 0.5kb downstream 1473 true Scaffold3675: 16029-17501 Capsella grandiflora
Cagra.3675s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold3675: 16029-16528 Capsella grandiflora
Cagra.3675s0006 1.0kb upstream 1.0kb upstream 1973 true Scaffold3675: 16529-18501 Capsella grandiflora
Cagra.3675s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold3675: 17502-18501 Capsella grandiflora
Cagra.3675s0006 1.0kb downstream 1.0kb downstream 1973 true Scaffold3675: 15529-17501 Capsella grandiflora
Cagra.3675s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold3675: 15529-16528 Capsella grandiflora
Cagra.3675s0006 2.0kb upstream 2.0kb upstream 2973 true Scaffold3675: 16529-19501 Capsella grandiflora
Cagra.3675s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold3675: 17502-19501 Capsella grandiflora
Cagra.3675s0006 2.0kb downstream 2.0kb downstream 2973 true Scaffold3675: 14529-17501 Capsella grandiflora
Cagra.3675s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold3675: 14529-16528 Capsella grandiflora
Cagra.3675s0006 5.0kb upstream 5.0kb upstream 5973 true Scaffold3675: 16529-22501 Capsella grandiflora
Cagra.3675s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold3675: 17502-22501 Capsella grandiflora
Cagra.3675s0006 5.0kb downstream 5.0kb downstream 5973 true Scaffold3675: 11529-17501 Capsella grandiflora
Cagra.3675s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold3675: 11529-16528 Capsella grandiflora
Cagra.3675s0006 10.0kb upstream 10.0kb upstream 10973 true Scaffold3675: 16529-27501 Capsella grandiflora
Cagra.3675s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold3675: 17502-27501 Capsella grandiflora
Cagra.3675s0006 10.0kb downstream 10.0kb downstream 10973 true Scaffold3675: 6529-17501 Capsella grandiflora
Cagra.3675s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold3675: 6529-16528 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379781 5261 Brassicaceae View MSA
123841588 5264 Brassicales-Malvales View MSA
124350849 5266 SBM View MSA
124254184 5268 Malvidae View MSA
124063509 5270 Rosid View MSA
123746238 5271 Pentapetalae View MSA
122796887 5272 Eudicot View MSA
122050930 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain