Gene : Cagra.3675s0016 C. grandiflora v1.1
Defline:  (1 of 4) PTHR22884:SF370 - HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH5-RELATED Genomic Order:  16
Name:  ? Cagra.3675s0016 Secondary Identifier:  ? PAC:28900853
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3675s0016 0.5kb upstream 0.5kb upstream 1406 true Scaffold3675: 49837-51242 Capsella grandiflora
Cagra.3675s0016 0.5kb upstream 0.5kb upstream 500 false Scaffold3675: 50743-51242 Capsella grandiflora
Cagra.3675s0016 0.5kb downstream 0.5kb downstream 1406 true Scaffold3675: 49337-50742 Capsella grandiflora
Cagra.3675s0016 0.5kb downstream 0.5kb downstream 500 false Scaffold3675: 49337-49836 Capsella grandiflora
Cagra.3675s0016 1.0kb upstream 1.0kb upstream 1906 true Scaffold3675: 49837-51742 Capsella grandiflora
Cagra.3675s0016 1.0kb upstream 1.0kb upstream 1000 false Scaffold3675: 50743-51742 Capsella grandiflora
Cagra.3675s0016 1.0kb downstream 1.0kb downstream 1906 true Scaffold3675: 48837-50742 Capsella grandiflora
Cagra.3675s0016 1.0kb downstream 1.0kb downstream 1000 false Scaffold3675: 48837-49836 Capsella grandiflora
Cagra.3675s0016 2.0kb upstream 2.0kb upstream 2906 true Scaffold3675: 49837-52742 Capsella grandiflora
Cagra.3675s0016 2.0kb upstream 2.0kb upstream 2000 false Scaffold3675: 50743-52742 Capsella grandiflora
Cagra.3675s0016 2.0kb downstream 2.0kb downstream 2906 true Scaffold3675: 47837-50742 Capsella grandiflora
Cagra.3675s0016 2.0kb downstream 2.0kb downstream 2000 false Scaffold3675: 47837-49836 Capsella grandiflora
Cagra.3675s0016 5.0kb upstream 5.0kb upstream 5906 true Scaffold3675: 49837-55742 Capsella grandiflora
Cagra.3675s0016 5.0kb upstream 5.0kb upstream 5000 false Scaffold3675: 50743-55742 Capsella grandiflora
Cagra.3675s0016 5.0kb downstream 5.0kb downstream 5906 true Scaffold3675: 44837-50742 Capsella grandiflora
Cagra.3675s0016 5.0kb downstream 5.0kb downstream 5000 false Scaffold3675: 44837-49836 Capsella grandiflora
Cagra.3675s0016 10.0kb upstream 10.0kb upstream 6787 true Scaffold3675: 49837-56623 Capsella grandiflora
Cagra.3675s0016 10.0kb upstream 10.0kb upstream 5881 false Scaffold3675: 50743-56623 Capsella grandiflora
Cagra.3675s0016 10.0kb downstream 10.0kb downstream 10906 true Scaffold3675: 39837-50742 Capsella grandiflora
Cagra.3675s0016 10.0kb downstream 10.0kb downstream 10000 false Scaffold3675: 39837-49836 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379281 5261 Brassicaceae View MSA
123839787 5264 Brassicales-Malvales View MSA
124349936 5266 SBM View MSA
124252064 5268 Malvidae View MSA
124069475 5270 Rosid View MSA
123753446 5271 Pentapetalae View MSA
122796724 5272 Eudicot View MSA
122050762 5273 Angiosperm View MSA
123428946 5275 Viridiplantae View MSA
121350126 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain